iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099802

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000339

Gene Name

POPTRDRAFT_554844; POPTR_0003s17710g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s17710	POPTR_0003s17710.1	POPTR_0003s17710.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	44.44	2.00e-72	270.00	IUUC-Ath-007116

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MENKDNNKIP STEESKMQCQ CDNNKKTPSP KHLQQIEEDN VREEEDFLDE FQCSVCLDLL 60
YKPVVLGCGH LSCFWCVFYS MNGLRESHCP ICRHQFNHFP SVCQLLHFLL MKMYPIAYKR 120

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Nucleotide Sequence
(Fasta)

ATTACGCAAA CCGAATAACT AGCTTGATAA AGAAAGACAC CGCCTCGTAC TCGTGTCTTC 60
TTTTGCTTCC TGTATCTCTC TCTCTCTGTC TGCCTCTCTG TCTCTTCAAA TTGAGAAAAA 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
IPR000433--Znf_ZZ

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2
PS01357--ZF_ZZ_1
PS50135--ZF_ZZ_2

Pfam

PF13445--zf-RING_UBOX
PF00569--ZZ

SMART

SM00184--RING
SM00291--ZnF_ZZ

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0003s17710g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000257	Aegilops tauschii	31.73	2.00e-45	175.00
IUUC-Atr-002773	Amborella trichopoda	44.02	2.00e-73	269.00
IUUC-Aly-005558	Arabidopsis lyrata	43.51	2.00e-74	272.00
IUUC-Ath-007116	Arabidopsis thaliana	44.44	1.00e-75	276.00
IUUC-Ago-007781	Ashbya gossypii	36.21	3.00e-07	49.30
IUUC-Afu-008971	Aspergillus fumigatus	30.67	5.00e-06	44.70
IUUC-Bdi-014243	Brachypodium distachyon	41.73	2.00e-67	249.00
IUUC-Bol-015948	Brassica oleracea	43.48	2.00e-75	275.00
IUUC-Bra-017661	Brassica rapa	44.29	2.00e-76	278.00
IUUC-Cre-023002	Chlamydomonas reinhardtii	58.70	4.00e-14	71.60
IUUC-Gma-042780	Glycine max	44.50	6.00e-83	300.00
IUUC-Hvu-047093	Hordeum vulgare	41.79	1.00e-64	239.00
IUUC-Itr-048553	Ictidomys tridecemlineatus	41.07	5.00e-07	50.40
IUUC-Lpe-051555	Leersia perrieri	46.13	4.00e-78	284.00
IUUC-Mtr-058729	Medicago truncatula	44.62	4.00e-80	291.00
IUUC-Mac-064489	Musa acuminata	45.85	5.00e-81	294.00
IUUC-Nfi-068575	Neosartorya fischeri	29.33	9.00e-06	43.90
IUUC-Oba-075420	Oryza barthii	43.58	3.00e-72	265.00
IUUC-Obr-076775	Oryza brachyantha	42.00	1.00e-67	249.00
IUUC-Ogl-077466	Oryza glaberrima	43.58	3.00e-72	265.00
IUUC-Ogu-079019	Oryza glumaepatula	43.58	3.00e-72	265.00
IUUC-Oin-079647	Oryza indica	43.58	3.00e-72	265.00
IUUC-Olo-080366	Oryza longistaminata	47.28	2.00e-46	178.00
IUUC-Ome-081125	Oryza meridionalis	44.23	5.00e-72	264.00
IUUC-Oni-082331	Oryza nivara	43.58	3.00e-72	265.00
IUUC-Opu-083181	Oryza punctata	44.48	8.00e-71	260.00
IUUC-Oru-085025	Oryza rufipogon	41.77	4.00e-61	227.00
IUUC-Osa-085632	Oryza sativa	44.23	2.00e-72	265.00
IUUC-Olu-087700	Ostreococcus lucimarinus	25.00	3.00e-21	95.50
IUUC-Ppe-101330	Prunus persica	49.72	5.00e-89	320.00
IUUC-Pgr-103569	Puccinia graminis	39.06	3.00e-06	45.40
IUUC-Sit-110342	Setaria italica	36.69	7.00e-64	237.00
IUUC-Sly-111024	Solanum lycopersicum	49.86	4.00e-92	331.00
IUUC-Stu-112506	Solanum tuberosum	48.34	1.00e-91	329.00
IUUC-Sbi-114720	Sorghum bicolor	46.34	8.00e-41	159.00
IUUC-Tca-121671	Theobroma cacao	44.35	2.00e-85	308.00
IUUC-Tae-124325	Triticum aestivum	38.29	1.00e-66	246.00
IUUC-Tur-126365	Triticum urartu	39.39	9.00e-43	166.00
IUUC-Vvi-131151	Vitis vinifera	46.27	6.00e-92	330.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence