iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108723

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377679

Gene Name

SELMODRAFT_2225

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_2225	EFJ07908	EFJ07908

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	8.90e-82	275.7	1	320

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeel...........w...kskkkavsprellkalkkeaeefsgye 88
           Gl NlgNtC++NSv+Q L++++ l++++l+  + +        ++g+l+++l+++f e+               +++ + ++p+ l+ al++++++fsgy+
   Q: 1    GLVNLGNTCFFNSVMQNLLAVRYLKDYFLN--PVAA-----GASEGPLTSALRRFFLEIngdnleafsgnAkkrHRDYTTYNPKGLFGALCSKSSRFSGYH 94
           9*****************************..3333.....45689*************666666655541445777779********************* PP
   S: 89   qqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqd 189
           qqD++E+l++lld+l+ e k+               + s+e+++ + k+ ++++++lF+gq+ s+++c ec+++ss  epfld+slp+p  + +   sl+ 
   Q: 95   QQDSHELLRCLLDGLQVEGKH---------------KESEEKNSANGKEDHTFVDHLFGGQFASTVTCCECGHSSSVLEPFLDVSLPIPFITAK---SLEG 177
           *****************9922...............3334456779999****************************************99987...**** PP
   S: 190  cLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsGsl 290
           cL++ftk e l gen++ c++c++ ++a+k+l ++k P+vL++hLkRf  +  +++ +k++ +v f + L+lspf++++ +       Y+L++vv HsG++
   Q: 178  CLQAFTKLEVLSGENAWGCDNCTR-RKATKRLVIRKAPPVLTVHLKRFAQD-MRGRLSKLTGHVAFDELLNLSPFLSTSRD----GGLYRLVGVVEHSGTM 272
           **********************96.55*********************555.569999*********99*******99554....68************** PP
   S: 291  ssGHYvayvkn......ekgk..WllfdDskVtevkeeevleetgstaYvlfY 335
           ++GHYva+v+       +  +  W++++Ds V+ ++ ++vl+   s+aY+lfY
   Q: 273  KGGHYVAFVRGgsagdgK--EnfWYYISDSDVRRTTLDQVLR---SEAYLLFY 320
           ***********6665433..156*******************...******** PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

GLVNLGNTCF FNSVMQNLLA VRYLKDYFLN PVAAGASEGP LTSALRRFFL EINGDNLEAF 60
SGNAKKRHRD YTTYNPKGLF GALCSKSSRF SGYHQQDSHE LLRCLLDGLQ VEGKHKESEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTCTCGTCA ACTTGGGGAA TACGTGCTTC TTCAACTCGG TCATGCAAAA CTTGCTCGCG 60
GTCAGGTACT TGAAGGACTA CTTTCTCAAT CCTGTCGCTG CTGGTGCTTC CGAGGGACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

smo:SELMODRAFT_2225

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cre-022662	Chlamydomonas reinhardtii	34.29	3.00e-37	148.00
IUUC-Gma-044402	Glycine max	50.88	2.00e-40	160.00
IUUC-Mtr-057945	Medicago truncatula	51.76	5.00e-41	162.00
IUUC-Mac-064941	Musa acuminata	49.43	8.00e-41	161.00
IUUC-Ppe-101794	Prunus persica	50.58	8.00e-41	161.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence