iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111226

Ensembl Protein ID

Solyc11g008580.1.1

UniProt Accession

K4D5B8; K4D5B8_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc11g008580.1	Solyc11g008580.1.1	Solyc11g008580.1.1

Status

Classification

Family	E-Value	Score	Start	End
E3 activity/RBR	9.50e-45	153.5	140	328

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RBR

   S: 1    CkvCllelsveeltvlleCehtfCkeClkqylelkikegqv.teiscpaaecpekleeseikellveeelykryekllleevveadaalk 89
           C +C+  ++ +e+   ++C h fC  C++ y+++ i +g     + cp+++c++ +  + i++ l++++ +k+y+++ ++++ve ++++k
   Q: 140  CGICFDVYPRKEIS-AAACGHPFCFTCWQGYISTSITDGPGcLMLRCPDPSCSAAIGLDMINK-LASDDDKKKYNRYFIRSFVEDNRKTK 227
           99********9988.669********************98758899*****************.699999******************** PP
   S: 90   wcpapdCslvvllekeaeklevecekcgkefCveCkeewHeglsCkelkeklakteeekeeaeskelleanskkCpkCkvyieknegCnh 179
           wcpap+C+++v +   + +  v+c +c+  fC++C ee H++++C +++++  k++    e+e+++++ ansk+CpkCk +iekn+gC+h
   Q: 228  WCPAPGCDYAVDYIVGSGSYDVTC-GCSYSFCWNCTEETHRPVDCGTVSKWILKNS---AESENMNWILANSKPCPKCKRPIEKNQGCMH 313
           ***********9999999******.****************************999...89***************************** PP
   S: 180  mtC.akCkaefCwlC 193
           +tC   Ck efCwlC
   Q: 314  ITCtPPCKFEFCWLC 328
           ***778********* PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MASEDELMMQ DATDDGESFD DDFYSGGDVH DDSDDDDVMD YDFIDNDSDD SDTVIAHHRS 60
QSNYSILNEA DIHKCQEESI TKISTVLSIP RVAAGILLRH YNWSVSKVND EWFADEGKVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCATCGG AGGATGAATT GATGATGCAG GATGCTACCG ACGACGGCGA GTCCTTCGAT 60
GATGATTTCT ACAGCGGCGG CGATGTTCAT GATGATTCCG ATGATGATGA CGTCATGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR001876--Znf_RanBP2
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01358--ZF_RANBP2_1
PS50199--ZF_RANBP2_2
PS50089--ZF_RING_2

Pfam

PF01485--IBR

SMART

SM00647--IBR
SM00547--ZnF_RBZ

Gene Ontology

GO:0005737--C:cytoplasm
GO:0000151--C:ubiquitin ligase complex
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sly:101248534

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000693	Aegilops tauschii	68.54	0.00e+00	736.00
IUUC-Atr-002495	Amborella trichopoda	75.00	0.00e+00	863.00
IUUC-Aly-005668	Arabidopsis lyrata	74.91	0.00e+00	831.00
IUUC-Ath-006834	Arabidopsis thaliana	73.14	0.00e+00	828.00
IUUC-Ani-009219	Aspergillus nidulans	34.75	2.00e-68	252.00
IUUC-Bdi-014714	Brachypodium distachyon	73.54	0.00e+00	808.00
IUUC-Bol-015311	Brassica oleracea	72.95	0.00e+00	798.00
IUUC-Bra-018031	Brassica rapa	72.22	0.00e+00	795.00
IUUC-Cho-024444	Choloepus hoffmanni	30.82	1.00e-53	203.00
IUUC-Eca-033431	Equus caballus	31.81	3.00e-56	211.00
IUUC-Fal-037068	Ficedula albicollis	31.81	1.00e-56	213.00
IUUC-Gma-042954	Glycine max	73.52	0.00e+00	868.00
IUUC-Hvu-047322	Hordeum vulgare	73.94	0.00e+00	823.00
IUUC-Lpe-051080	Leersia perrieri	73.65	0.00e+00	831.00
IUUC-Mtr-058263	Medicago truncatula	71.43	0.00e+00	838.00
IUUC-Mac-065497	Musa acuminata	69.70	0.00e+00	836.00
IUUC-Mlu-067187	Myotis lucifugus	31.71	2.00e-57	216.00
IUUC-Oba-075918	Oryza barthii	63.18	0.00e+00	678.00
IUUC-Obr-076649	Oryza brachyantha	74.95	0.00e+00	736.00
IUUC-Ogl-077640	Oryza glaberrima	74.21	0.00e+00	827.00
IUUC-Ogu-078785	Oryza glumaepatula	72.36	0.00e+00	797.00
IUUC-Oin-079448	Oryza indica	74.40	0.00e+00	830.00
IUUC-Olo-080626	Oryza longistaminata	71.57	0.00e+00	713.00
IUUC-Ome-081470	Oryza meridionalis	74.95	0.00e+00	833.00
IUUC-Oni-082202	Oryza nivara	72.54	0.00e+00	801.00
IUUC-Opu-084143	Oryza punctata	70.74	0.00e+00	790.00
IUUC-Oru-084778	Oryza rufipogon	72.54	0.00e+00	801.00
IUUC-Osa-086044	Oryza sativa	76.17	0.00e+00	739.00
IUUC-Ppa-095545	Physcomitrella patens	66.79	0.00e+00	746.00
IUUC-Pop-099195	Populus trichocarpa	75.89	0.00e+00	894.00
IUUC-Ppe-101468	Prunus persica	81.08	0.00e+00	907.00
IUUC-Sce-106154	Saccharomyces cerevisiae	29.68	3.00e-47	182.00
IUUC-Sha-106765	Sarcophilus harrisii	31.58	1.00e-55	209.00
IUUC-Spo-108222	Schizosaccharomyces pombe	33.95	5.00e-69	254.00
IUUC-Smo-109424	Selaginella moellendorffii	67.47	0.00e+00	754.00
IUUC-Sit-110645	Setaria italica	75.51	0.00e+00	851.00
IUUC-Sbi-114839	Sorghum bicolor	73.69	0.00e+00	834.00
IUUC-Tru-117711	Takifugu rubripes	29.81	3.00e-61	229.00
IUUC-Tca-121539	Theobroma cacao	78.46	0.00e+00	920.00
IUUC-Tae-123155	Triticum aestivum	74.25	0.00e+00	823.00
IUUC-Tur-126546	Triticum urartu	68.47	0.00e+00	740.00
IUUC-Vpa-130259	Vicugna pacos	30.97	1.00e-52	200.00
IUUC-Vvi-131543	Vitis vinifera	82.29	0.00e+00	924.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence