iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043565

UUCD1 version

UUC-GlM-01262

Ensembl Protein ID

GLYMA03G41360.1

UniProt Accession

I1JRU8; I1JRU8_SOYBN

Genbank Protein ID

KRH68827.1; KRH68828.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000836; CM000836

Gene Name

LOC100806619; GLYMA_03G253100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA03G41360	GLYMA03G41360.1	GLYMA03G41360.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.30e-30	105.2	48	119

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p++f+CpIs +lM+dPv+l++G+tydr  I++wl++g++tcP t+q l+++ l+Pn+ +r++i +wc +++
   Q: 48   LPPQFRCPISTQLMSDPVILSTGQTYDRPFIQRWLNEGHRTCPQTQQVLSHTILTPNYLVRDMILQWCRDRG 119
           799*****************************************************************9876 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MASELKEKLR ELVKAIVDSD DYSLQAADEA IATLSSLKHL KSPDDFPLPP QFRCPISTQL 60
MSDPVILSTG QTYDRPFIQR WLNEGHRTCP QTQQVLSHTI LTPNYLVRDM ILQWCRDRGI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACTTAAATA CGATAGGTTT TTATTAAAAT AAAAAGAAGG ATCGTAGAAG GAAATCATAT 60
GATATTTAAG ACACTATGGC AAGATATTAA AAAAGAGGAT ATCTTTTGGT AGAGATTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100806619

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000164	Aegilops tauschii	44.25	4.00e-76	278.00
IUUC-Hvu-047411	Hordeum vulgare	47.78	9.00e-75	273.00
IUUC-Lpe-050825	Leersia perrieri	51.93	2.00e-105	376.00
IUUC-Mtr-058046	Medicago truncatula	74.34	1.00e-180	625.00
IUUC-Mac-065616	Musa acuminata	52.23	4.00e-109	388.00
IUUC-Ome-081796	Oryza meridionalis	52.86	7.00e-105	374.00
IUUC-Opu-084131	Oryza punctata	53.12	6.00e-106	377.00
IUUC-Pop-099087	Populus trichocarpa	69.83	2.00e-162	565.00
IUUC-Ppe-101340	Prunus persica	66.44	1.00e-161	563.00
IUUC-Tae-123857	Triticum aestivum	46.86	7.00e-83	301.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence