iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002640

Ensembl Protein ID

ERN05910

UniProt Accession

W1PFR5; W1PFR5_AMBTC

Genbank Protein ID

ERN05910.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KI393980

Gene Name

AMTR_s00006p00267930

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00006p00267930	ERN05910	ERN05910

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.20e-25	87.5	295	358

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqa 67
            +f+CpIsle+M+dPv++++G+tydr sI +wl+ g++tcP+t+ +lt++ + Pn+++++l ++
   Q: 295  TDFRCPISLEIMTDPVTISTGHTYDRISILQWLSAGNTTCPKTGVTLTHSHIFPNNAVHNLTHK 358
           58**********************************************************9987 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MALARRRFLT LPAVAPCPDI DPAALLSSLI RLSRTICTTY LPTHRRDARE LIRQTTTLLL 60
LFDELSDHHF SSTALLALSE LHFTLQKLNF LLHDCCRPGA RLWLALNSRR LSHECRSLSR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTTGG CCAGACGACG GTTTCTCACG CTCCCTGCGG TTGCTCCCTG CCCGGATATC 60
GACCCTGCGG CCCTCCTCTC ATCTCTGATT CGTCTCTCCC GCACCATATG CACCACCTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

atr:18434097

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000617	Aegilops tauschii	31.84	2.00e-65	241.00
IUUC-Aly-006337	Arabidopsis lyrata	33.43	2.00e-103	369.00
IUUC-Ath-007598	Arabidopsis thaliana	33.53	2.00e-103	369.00
IUUC-Bdi-014095	Brachypodium distachyon	34.15	1.00e-87	316.00
IUUC-Bol-015352	Brassica oleracea	33.67	8.00e-98	350.00
IUUC-Bra-017018	Brassica rapa	33.67	1.00e-92	333.00
IUUC-Cne-026806	Cryptococcus neoformans	33.33	6.00e-06	43.50
IUUC-Fox-037843	Fusarium oxysporum	34.09	7.00e-04	37.00
IUUC-Gma-043679	Glycine max	38.33	6.00e-126	443.00
IUUC-Hvu-047204	Hordeum vulgare	34.73	2.00e-102	365.00
IUUC-Lpe-051010	Leersia perrieri	36.01	5.00e-72	264.00
IUUC-Mtr-058794	Medicago truncatula	38.81	3.00e-122	431.00
IUUC-Mvi-060511	Microbotryum violaceum	34.43	2.00e-05	42.40
IUUC-Mac-064527	Musa acuminata	37.36	8.00e-57	213.00
IUUC-Ogl-077133	Oryza glaberrima	34.58	3.00e-75	275.00
IUUC-Ogu-078633	Oryza glumaepatula	33.97	7.00e-76	277.00
IUUC-Oin-079248	Oryza indica	34.11	2.00e-76	279.00
IUUC-Ome-081678	Oryza meridionalis	34.01	1.00e-75	276.00
IUUC-Oni-082545	Oryza nivara	33.97	1.00e-76	280.00
IUUC-Opu-083981	Oryza punctata	34.30	7.00e-85	307.00
IUUC-Oru-084317	Oryza rufipogon	33.63	4.00e-71	261.00
IUUC-Osa-085940	Oryza sativa	35.00	4.00e-69	254.00
IUUC-Pop-099290	Populus trichocarpa	39.40	1.00e-138	486.00
IUUC-Ppe-102097	Prunus persica	40.48	6.00e-129	453.00
IUUC-Sit-110113	Setaria italica	36.10	7.00e-96	343.00
IUUC-Sly-111836	Solanum lycopersicum	39.27	3.00e-133	467.00
IUUC-Stu-112861	Solanum tuberosum	38.98	2.00e-133	468.00
IUUC-Sbi-114188	Sorghum bicolor	33.06	9.00e-83	300.00
IUUC-Sre-115187	Sporisorium reilianum	32.81	4.00e-07	47.40
IUUC-Tca-121206	Theobroma cacao	41.05	2.00e-134	471.00
IUUC-Tae-125849	Triticum aestivum	34.34	5.00e-104	370.00
IUUC-Tur-126514	Triticum urartu	32.55	2.00e-78	285.00
IUUC-Uma-129520	Ustilago maydis	33.33	8.00e-07	46.60
IUUC-Vvi-131344	Vitis vinifera	40.32	1.00e-131	462.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence