iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111836

Ensembl Protein ID

Solyc03g114160.1.1

UniProt Accession

K4BKR8; K4BKR8_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc03g114160.1	Solyc03g114160.1.1	Solyc03g114160.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.20e-32	110.0	277	348

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           pe+f+CpIslelM+dPv++++G+tydr+sI+kwl+sg+  cP+t+++l++++lvPn +lr+liq++c++n++
   Q: 277  PEDFRCPISLELMTDPVTVSTGQTYDRASIQKWLKSGNLLCPKTGETLQSTELVPNSSLRNLIQQFCADNGI 348
           89******************************************************************9986 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MIQRFDRNDR RILTFPAVHP CEGISPATLL NSLIILSRDI CNFKSNFFAT QRRNVREMIR 60
QVGILLIFFE EILDHLPSDR DSIVLCFAEL HTTFQKINFL LDDCTREGAK TWMLMKSHSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTCAAA GATTTGATCG GAATGATCGC CGGATTTTGA CATTCCCGGC GGTACATCCA 60
TGTGAGGGGA TATCTCCGGC TACCCTTTTG AATTCTTTGA TTATTCTATC TAGAGACATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sly:101249811

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000617	Aegilops tauschii	35.99	4.00e-90	324.00
IUUC-Atr-002640	Amborella trichopoda	39.39	5.00e-114	404.00
IUUC-Bdi-014095	Brachypodium distachyon	36.66	2.00e-108	386.00
IUUC-Gma-043679	Glycine max	56.77	0.00e+00	754.00
IUUC-Mtr-058794	Medicago truncatula	57.87	0.00e+00	741.00
IUUC-Mac-064527	Musa acuminata	48.62	3.00e-83	302.00
IUUC-Obr-076695	Oryza brachyantha	38.10	3.00e-71	261.00
IUUC-Ogu-078633	Oryza glumaepatula	38.64	1.00e-93	336.00
IUUC-Oin-079248	Oryza indica	38.45	6.00e-93	334.00
IUUC-Oni-082545	Oryza nivara	38.42	8.00e-94	337.00
IUUC-Oru-084317	Oryza rufipogon	38.71	3.00e-95	342.00
IUUC-Osa-085294	Oryza sativa	38.61	2.00e-93	336.00
IUUC-Pop-098999	Populus trichocarpa	60.61	0.00e+00	803.00
IUUC-Ppe-102097	Prunus persica	59.68	0.00e+00	747.00
IUUC-Sit-110113	Setaria italica	38.02	3.00e-120	424.00
IUUC-Stu-112861	Solanum tuberosum	93.55	0.00e+00	1311.00
IUUC-Sbi-114188	Sorghum bicolor	36.51	3.00e-107	381.00
IUUC-Tca-121206	Theobroma cacao	61.88	0.00e+00	850.00
IUUC-Tur-126514	Triticum urartu	36.14	3.00e-97	348.00
IUUC-Vvi-130884	Vitis vinifera	59.44	0.00e+00	781.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence