iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gga-040313

Ensembl Protein ID

ENSGALP00000034188.3

UniProt Accession

Q98UC3; F1NVD8; Q98UC3_CHICK

Genbank Protein ID

AAK00732.1; AAK97650.1

Protein Name

Ubiquitin fusion-degradation 1-like protein

Genbank Nucleotide ID

AADN04000193; AF407671

Gene Name

Ufd1l; UFD1L

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000001593.6	ENSGALT00000034831.4	ENSGALP00000034188.3
ENSGALG00000001593.6	ENSGALT00000051602.1	ENSGALP00000054578.1
ENSGALG00000001593.6	ENSGALT00000086868.1	ENSGALP00000060957.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Other	94.79	1.00e-170	596.00	IUUC-Hsa-046680
UBD/Other/Other	94.79	1.00e-170	596.00	IUUC-Hsa-046680
UBD/Other/Other	38.79	7.00e-52	198.00	IUUC-Sce-106174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Gallus gallus

Protein Sequence
(Fasta)

MFSFNMFDHP IPRVFQNRFS TQYRCFSVSM LAGPNDRSDV EKGGKIIMPP SALDQLSRLN 60
ITYPMLFKLT NKNSDRMTHC GVLEFVADEG ICYLPHWMMQ NLLLEEGGLV QVESVNLQVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGGCGGTG TAGCGGCGTC CGGCGGCGGA GCGGTCGCGC CCGCCCTCAG CAGCAGCGGC 60
AGCAGCACAG CTCCCCGCAC CGCGCCGCCG CCATGGTGAG GCCCGGGGGG CGCCGGGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004854--UFD1

Pfam

PF03152--UFD1

Gene Ontology

GO:0005634--C:nucleus
GO:0036501--C:UFD1-NPL4 complex
GO:0034098--C:VCP-NPL4-UFD1 AAA ATPase complex
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0039536--P:negative regulation of RIG-I signaling pathway
GO:0032480--P:negative regulation of type I interferon production
GO:0030970--P:retrograde protein transport, ER to cytosol
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

gga:374186

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000441	Aegilops tauschii	50.90	5.00e-65	240.00
IUUC-Aml-001398	Ailuropoda melanoleuca	94.77	3.00e-171	593.00
IUUC-Atr-002449	Amborella trichopoda	48.78	2.00e-54	205.00
IUUC-Apl-004065	Anas platyrhynchos	98.09	1.00e-148	518.00
IUUC-Aca-004973	Anolis carolinensis	93.49	7.00e-173	598.00
IUUC-Aly-005501	Arabidopsis lyrata	51.07	9.00e-66	243.00
IUUC-Ath-007324	Arabidopsis thaliana	52.17	4.00e-67	248.00
IUUC-Ago-007918	Ashbya gossypii	38.20	1.00e-54	206.00
IUUC-Acl-008362	Aspergillus clavatus	41.74	3.00e-67	248.00
IUUC-Afl-008690	Aspergillus flavus	53.70	5.00e-64	237.00
IUUC-Afu-008787	Aspergillus fumigatus	42.34	1.00e-65	243.00
IUUC-Ani-009385	Aspergillus nidulans	56.00	1.00e-56	213.00
IUUC-Ang-009709	Aspergillus niger	55.72	2.00e-63	236.00
IUUC-Aor-010240	Aspergillus oryzae	53.70	5.00e-64	237.00
IUUC-Ate-010551	Aspergillus terreus	55.07	1.00e-63	236.00
IUUC-Ame-011417	Astyanax mexicanus	87.99	7.00e-158	549.00
IUUC-Bgr-011986	Blumeria graminis	55.73	3.00e-61	228.00
IUUC-Bta-012559	Bos taurus	94.27	2.00e-124	437.00
IUUC-Bci-013767	Botrytis cinerea	56.08	6.00e-58	217.00
IUUC-Bdi-014336	Brachypodium distachyon	51.11	1.00e-64	239.00
IUUC-Bol-015824	Brassica oleracea	45.42	5.00e-67	247.00
IUUC-Bra-016732	Brassica rapa	45.10	7.00e-67	246.00
IUUC-Cel-018590	Caenorhabditis elegans	40.47	5.00e-51	194.00
IUUC-Cja-019487	Callithrix jacchus	95.44	1.00e-172	598.00
IUUC-Cfa-020497	Canis familiaris	94.46	2.00e-171	593.00
IUUC-Cpo-022150	Cavia porcellus	94.77	3.00e-171	593.00
IUUC-Cre-023007	Chlamydomonas reinhardtii	49.78	3.00e-58	217.00
IUUC-Csa-023602	Chlorocebus sabaeus	94.79	7.00e-172	595.00
IUUC-Cin-025594	Ciona intestinalis	57.05	4.00e-93	334.00
IUUC-Csv-026040	Ciona savignyi	54.95	9.00e-95	339.00
IUUC-Cgl-026460	Colletotrichum gloeosporioides	43.32	2.00e-51	196.00
IUUC-Cne-026990	Cryptococcus neoformans	42.49	2.00e-39	156.00
IUUC-Cme-027323	Cyanidioschyzon merolae	47.47	9.00e-42	163.00
IUUC-Dre-027987	Danio rerio	86.36	4.00e-153	533.00
IUUC-Dor-030294	Dipodomys ordii	93.49	4.00e-169	586.00
IUUC-Dse-031411	Dothistroma septosporum	37.35	2.00e-57	216.00
IUUC-Dme-031798	Drosophila melanogaster	55.70	7.00e-94	336.00
IUUC-Ete-032432	Echinops telfairi	93.49	2.00e-169	587.00
IUUC-Eca-034427	Equus caballus	94.79	7.00e-172	595.00
IUUC-Eeu-034917	Erinaceus europaeus	69.38	7.00e-110	389.00
IUUC-Fca-035380	Felis catus	94.46	2.00e-171	593.00
IUUC-Fal-037659	Ficedula albicollis	98.01	2.00e-173	601.00
IUUC-Fox-038062	Fusarium oxysporum	44.90	3.00e-21	94.40
IUUC-Fso-038111	Fusarium solani	35.09	8.00e-52	197.00
IUUC-Gmo-039298	Gadus morhua	85.44	8.00e-146	509.00
IUUC-Ggr-039771	Gaeumannomyces graminis	50.26	5.00e-55	207.00
IUUC-Gac-042009	Gasterosteus aculeatus	84.84	1.00e-146	512.00
IUUC-Gma-043844	Glycine max	49.63	4.00e-68	251.00
IUUC-Ggo-044639	Gorilla gorilla	84.84	8.00e-167	579.00
IUUC-Hsa-046680	Homo sapiens	94.79	7.00e-172	595.00
IUUC-Hvu-047614	Hordeum vulgare	51.36	5.00e-65	240.00
IUUC-Itr-047987	Ictidomys tridecemlineatus	94.77	3.00e-171	593.00
IUUC-Kpa-049136	Komagataella pastoris	35.92	2.00e-54	205.00
IUUC-Lch-050607	Latimeria chalumnae	89.40	7.00e-158	549.00
IUUC-Lpe-050726	Leersia perrieri	49.31	2.00e-60	226.00
IUUC-Loc-051848	Lepisosteus oculatus	89.00	1.00e-160	558.00
IUUC-Lma-053187	Leptosphaeria maculans	41.64	2.00e-64	238.00
IUUC-Laf-053569	Loxodonta africana	93.53	1.00e-168	585.00
IUUC-Mcc-055275	Macaca mulatta	94.46	5.00e-171	593.00
IUUC-Mor-056967	Magnaporthe oryzae	49.49	7.00e-56	210.00
IUUC-Mpo-057399	Magnaporthe poae	50.78	2.00e-55	209.00
IUUC-Mtr-058353	Medicago truncatula	50.00	2.00e-64	238.00
IUUC-Mla-058830	Melampsora laricipopulina	44.04	4.00e-42	165.00
IUUC-Mga-059803	Meleagris gallopavo	99.24	5.00e-150	523.00
IUUC-Mvi-060456	Microbotryum violaceum	46.81	4.00e-45	175.00
IUUC-Mmr-060573	Microcebus murinus	94.46	3.00e-171	593.00
IUUC-Mdo-062831	Monodelphis domestica	95.77	2.00e-173	600.00
IUUC-Mmu-064302	Mus musculus	95.11	2.00e-171	594.00
IUUC-Mac-064745	Musa acuminata	50.43	2.00e-64	239.00
IUUC-Mpu-065922	Mustela putorius furo	94.46	1.00e-171	595.00
IUUC-Mlu-068236	Myotis lucifugus	93.53	1.00e-169	588.00
IUUC-Nfi-068417	Neosartorya fischeri	42.34	1.00e-65	243.00
IUUC-Ncr-068747	Neurospora crassa	47.21	6.00e-53	201.00
IUUC-Nle-069948	Nomascus leucogenys	84.59	4.00e-167	580.00
IUUC-Opr-070919	Ochotona princeps	80.07	2.00e-135	474.00
IUUC-Ont-071467	Oreochromis niloticus	86.73	1.00e-152	531.00
IUUC-Oan-073436	Ornithorhynchus anatinus	76.36	2.00e-69	253.00
IUUC-Ocu-074427	Oryctolagus cuniculus	94.46	3.00e-164	570.00
IUUC-Oba-075440	Oryza barthii	50.00	9.00e-65	239.00
IUUC-Obr-076275	Oryza brachyantha	50.23	2.00e-59	221.00
IUUC-Ogl-077237	Oryza glaberrima	50.00	1.00e-64	239.00
IUUC-Ogu-078934	Oryza glumaepatula	50.00	8.00e-65	240.00
IUUC-Oin-079475	Oryza indica	50.63	4.00e-65	241.00
IUUC-Olo-080285	Oryza longistaminata	59.04	1.00e-56	211.00
IUUC-Ome-081887	Oryza meridionalis	50.64	8.00e-65	239.00
IUUC-Oni-082064	Oryza nivara	50.42	4.00e-65	241.00
IUUC-Opu-083610	Oryza punctata	50.64	9.00e-65	239.00
IUUC-Oru-084911	Oryza rufipogon	42.99	3.00e-65	241.00
IUUC-Osa-085366	Oryza sativa	50.00	9.00e-65	239.00
IUUC-Ola-086846	Oryzias latipes	75.29	2.00e-138	484.00
IUUC-Olu-087879	Ostreococcus lucimarinus	45.10	2.00e-57	216.00
IUUC-Oga-089017	Otolemur garnettii	93.85	3.00e-169	587.00
IUUC-Oar-089970	Ovis aries	90.85	3.00e-162	563.00
IUUC-Ptr-091147	Pan troglodytes	85.76	8.00e-157	545.00
IUUC-Pan-091757	Papio anubis	87.66	5.00e-154	536.00
IUUC-Psi-093931	Pelodiscus sinensis	98.05	2.00e-176	610.00
IUUC-Pno-094775	Phaeosphaeria nodorum	50.75	3.00e-58	218.00
IUUC-Ppa-095156	Physcomitrella patens	50.45	1.00e-62	233.00
IUUC-Pfo-097295	Poecilia formosa	85.53	8.00e-152	529.00
IUUC-Pab-098537	Pongo abelii	94.79	7.00e-172	595.00
IUUC-Pop-099436	Populus trichocarpa	50.00	4.00e-66	244.00
IUUC-Pca-100631	Procavia capensis	82.61	9.00e-160	555.00
IUUC-Ppe-101259	Prunus persica	50.00	1.00e-65	242.00
IUUC-Pva-102679	Pteropus vampyrus	86.13	1.00e-152	531.00
IUUC-Pgr-103475	Puccinia graminis	45.10	2.00e-44	172.00
IUUC-Ptt-104012	Puccinia triticina	38.24	1.00e-31	130.00
IUUC-Pte-104071	Pyrenophora teres	53.93	7.00e-61	227.00
IUUC-Pyt-104501	Pyrenophora triticirepentis	53.93	8.00e-61	227.00
IUUC-Rno-104858	Rattus norvegicus	94.46	4.00e-171	593.00
IUUC-Sce-106174	Saccharomyces cerevisiae	39.26	2.00e-54	205.00
IUUC-Sha-107075	Sarcophilus harrisii	95.75	3.00e-173	600.00
IUUC-Sja-107663	Schizosaccharomyces japonicus	43.33	8.00e-60	223.00
IUUC-Spo-108259	Schizosaccharomyces pombe	44.87	2.00e-53	202.00
IUUC-Ssl-108473	Sclerotinia sclerotiorum	40.00	3.00e-51	195.00
IUUC-Smo-109290	Selaginella moellendorffii	53.71	2.00e-65	241.00
IUUC-Sit-109992	Setaria italica	51.50	2.00e-64	239.00
IUUC-Sly-110858	Solanum lycopersicum	51.12	1.00e-63	236.00
IUUC-Stu-112028	Solanum tuberosum	55.25	4.00e-58	217.00
IUUC-Sar-113061	Sorex araneus	94.14	2.00e-170	590.00
IUUC-Sbi-114882	Sorghum bicolor	43.31	5.00e-65	240.00
IUUC-Sre-115104	Sporisorium reilianum	46.60	7.00e-44	171.00
IUUC-Ssc-115403	Sus scrofa	94.14	9.00e-171	592.00
IUUC-Tgu-117013	Taeniopygia guttata	98.69	4.00e-177	613.00
IUUC-Tru-118307	Takifugu rubripes	87.01	4.00e-149	520.00
IUUC-Tsy-119309	Tarsius syrichta	80.99	1.00e-63	236.00
IUUC-Tni-120209	Tetraodon nigroviridis	86.41	2.00e-147	514.00
IUUC-Tca-121421	Theobroma cacao	50.43	6.00e-66	243.00
IUUC-Tre-122235	Trichoderma reesei	45.13	5.00e-51	194.00
IUUC-Tvi-122421	Trichoderma virens	45.10	1.00e-51	196.00
IUUC-Tae-124587	Triticum aestivum	51.36	2.00e-65	241.00
IUUC-Tur-126353	Triticum urartu	35.92	6.00e-25	108.00
IUUC-Tme-126918	Tuber melanosporum	53.65	1.00e-59	223.00
IUUC-Ttr-129286	Tursiops truncatus	85.46	9.00e-157	545.00
IUUC-Uma-129404	Ustilago maydis	47.64	4.00e-45	175.00
IUUC-Vda-129746	Verticillium dahliae	36.53	1.00e-52	199.00
IUUC-Vpa-130648	Vicugna pacos	63.74	6.00e-24	104.00
IUUC-Vvi-131301	Vitis vinifera	50.87	2.00e-65	242.00
IUUC-Xtr-132583	Xenopus tropicalis	91.53	6.00e-165	572.00
IUUC-Xma-133129	Xiphophorus maculatus	85.85	9.00e-152	528.00
IUUC-Yli-134515	Yarrowia lipolytica	46.11	6.00e-50	191.00
IUUC-Zma-135266	Zea mays	42.59	1.00e-64	239.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence