iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078280

Ensembl Protein ID

OGLUM04G19440.1

UniProt Accession

A0A0D9ZNF3; A0A0D9ZNF3_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM04G19440	OGLUM04G19440.1	OGLUM04G19440.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-07	32.7	39	90

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw.......pglknssskefrCPlCr 46
           C iCl+   + p+v+ CgH+++  C++ w         ++nss  + +CP+C+
   Q: 39   CNICLDFAAE-PVVTLCGHLYCWPCIYEWlcpgvgsTASNNSSLARRQCPVCK 90
           99****8888.999*****************99998888888888889****7 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MDQIYMAAVN NKTSLPDDEP MKKISGDMPV TAGNACFDCN ICLDFAAEPV VTLCGHLYCW 60
PCIYEWLCPG VGSTASNNSS LARRQCPVCK ATLSPDMLVP LYGRGGSLKK SLNGVPIPRR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACCAGA TTTACATGGC TGCTGTCAAT AACAAGACTT CATTGCCTGA TGATGAGCCA 60
ATGAAGAAAA TTAGTGGAGA TATGCCTGTG ACTGCTGGAA ACGCTTGCTT TGACTGCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000767	Aegilops tauschii	67.21	1.00e-88	318.00
IUUC-Bdi-014949	Brachypodium distachyon	73.33	1.00e-92	331.00
IUUC-Gma-044004	Glycine max	37.25	2.00e-30	125.00
IUUC-Hvu-047276	Hordeum vulgare	69.26	7.00e-93	332.00
IUUC-Lpe-051528	Leersia perrieri	89.12	7.00e-120	423.00
IUUC-Mtr-058147	Medicago truncatula	36.97	1.00e-29	122.00
IUUC-Mac-065357	Musa acuminata	46.90	1.00e-47	182.00
IUUC-Obr-076866	Oryza brachyantha	91.63	1.00e-118	418.00
IUUC-Ogl-077734	Oryza glaberrima	99.58	1.00e-133	468.00
IUUC-Oin-079906	Oryza indica	100.00	8.00e-135	471.00
IUUC-Olo-081070	Oryza longistaminata	99.58	2.00e-134	470.00
IUUC-Ome-081915	Oryza meridionalis	99.58	2.00e-134	470.00
IUUC-Oni-082950	Oryza nivara	100.00	8.00e-135	471.00
IUUC-Opu-083549	Oryza punctata	95.82	3.00e-128	450.00
IUUC-Osa-085904	Oryza sativa	100.00	8.00e-135	471.00
IUUC-Pop-099944	Populus trichocarpa	37.50	2.00e-27	115.00
IUUC-Ppe-101989	Prunus persica	37.21	4.00e-27	114.00
IUUC-Sit-110543	Setaria italica	70.12	6.00e-97	346.00
IUUC-Sly-110881	Solanum lycopersicum	37.55	1.00e-26	112.00
IUUC-Stu-112310	Solanum tuberosum	37.79	6.00e-28	116.00
IUUC-Sbi-114178	Sorghum bicolor	69.71	4.00e-97	347.00
IUUC-Tca-121702	Theobroma cacao	36.07	4.00e-27	114.00
IUUC-Tae-124302	Triticum aestivum	68.44	6.00e-92	329.00
IUUC-Tur-126644	Triticum urartu	66.52	8.00e-82	296.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence