iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115726

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU550681

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000016189.2	ENSSSCT00000017629.2	ENSSSCP00000017151.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.20e-23	79.7	44	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtgvll 36
           H++sv+c+++   ++tl v+G+ D +  vW+l++g ll
   Q: 44   HSASVFCVSLdpkTNTLAVTGGEDDKAFVWRLSDGELL 81
           99*********8655999**************999875 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MEDVDFEEEE EEEGNEEGWV LEPQEGVVGS MEGPDDSEVT FALHSASVFC VSLDPKTNTL 60
AVTGGEDDKA FVWRLSDGEL LFECAGHKDS VTCAGFSHDS TLVATGDMSG LLKVWQVDTK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCCCTTCCT CTCTCCCCCA ACCCCACACT TAGTTCTCAG GCCTGGCCGG GGTGGGGGTT 60
CCCCTGACGC CTCCTCTGGC CCTTCCCCTC ACACACCCCC TTCCCATCAT CCCCTCGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030687--C:preribosome, large subunit precursor
GO:0051082--F:unfolded protein binding
GO:0042273--P:ribosomal large subunit biogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006277	Arabidopsis lyrata	33.18	1.00e-31	130.00
IUUC-Bra-017115	Brassica rapa	34.43	5.00e-27	114.00
IUUC-Cel-018305	Caenorhabditis elegans	35.61	6.00e-29	121.00
IUUC-Cre-022781	Chlamydomonas reinhardtii	33.91	3.00e-26	112.00
IUUC-Csv-026218	Ciona savignyi	52.51	9.00e-67	246.00
IUUC-Dme-031587	Drosophila melanogaster	41.04	2.00e-36	146.00
IUUC-Ete-033100	Echinops telfairi	96.12	5.00e-115	406.00
IUUC-Gmo-039090	Gadus morhua	70.81	9.00e-90	323.00
IUUC-Lma-053153	Leptosphaeria maculans	25.84	7.00e-15	75.10
IUUC-Mla-058856	Melampsora laricipopulina	36.42	4.00e-28	119.00
IUUC-Mvi-060237	Microbotryum violaceum	37.07	4.00e-38	152.00
IUUC-Obr-076059	Oryza brachyantha	33.64	3.00e-38	152.00
IUUC-Psi-093979	Pelodiscus sinensis	86.31	2.00e-87	314.00
IUUC-Pgr-103362	Puccinia graminis	32.77	3.00e-32	132.00
IUUC-Ptt-103756	Puccinia triticina	31.90	1.00e-31	130.00
IUUC-Sbi-114189	Sorghum bicolor	35.75	5.00e-38	151.00
IUUC-Sre-115029	Sporisorium reilianum	37.16	1.00e-32	134.00
IUUC-Tca-121686	Theobroma cacao	36.04	6.00e-40	157.00
IUUC-Tme-127079	Tuber melanosporum	27.92	4.00e-14	72.40
IUUC-Uma-129624	Ustilago maydis	36.70	5.00e-35	141.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence