iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132126

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

YOD1 deubiquitinase

Genbank Nucleotide ID

AAMC01008894

Gene Name

yod1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000017106.1	ENSXETT00000037286.1	ENSXETP00000037286.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/OTU	29.41	9.00e-34	138.00	IUUC-Sce-106323
ULD/UDP/UFD/UBX	29.41	9.00e-34	138.00	IUUC-Sce-106323

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MLRLRCKTRE GTQLLQGLTD RSSIRELQER IAGLTGISGP QQRVMVGFPP ASLDLSDGEA 60
TLKNLPIKSG DTLIVEEDKS KLKSEIPPVS KTDLGNWNAP AQPTIVRRVV PADNSCLFTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTGCGGC TTAGATGTAA AACCCGAGAG GGTACCCAGC TCCTACAAGG TCTCACAGAC 60
CGCTCCAGTA TCCGGGAGTT GCAGGAGCGC ATAGCAGGTC TTACAGGTAT TTCAGGGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003323--OTU_dom
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR013087--Znf_C2H2_type

PROSITE

PS50802--OTU
PS50053--UBIQUITIN_2
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF02338--OTU

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0046872--F:metal ion binding
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0030968--P:endoplasmic reticulum unfolded protein response
GO:0016579--P:protein deubiquitination
GO:0030433--P:ubiquitin-dependent ERAD pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000271	Aegilops tauschii	45.31	2.00e-43	168.00
IUUC-Aml-001860	Ailuropoda melanoleuca	70.07	1.00e-128	452.00
IUUC-Atr-002548	Amborella trichopoda	47.44	2.00e-51	194.00
IUUC-Apl-004025	Anas platyrhynchos	77.50	1.00e-105	375.00
IUUC-Aca-004505	Anolis carolinensis	73.03	6.00e-132	463.00
IUUC-Aly-005999	Arabidopsis lyrata	48.10	2.00e-50	191.00
IUUC-Ath-006774	Arabidopsis thaliana	48.08	8.00e-51	192.00
IUUC-Ago-007741	Ashbya gossypii	34.43	2.00e-38	152.00
IUUC-Acl-008278	Aspergillus clavatus	33.23	1.00e-42	166.00
IUUC-Afl-008710	Aspergillus flavus	34.99	6.00e-45	174.00
IUUC-Afu-009009	Aspergillus fumigatus	33.14	7.00e-45	174.00
IUUC-Ani-009430	Aspergillus nidulans	32.02	1.00e-40	159.00
IUUC-Ang-009508	Aspergillus niger	40.62	2.00e-37	149.00
IUUC-Aor-009992	Aspergillus oryzae	34.78	1.00e-45	176.00
IUUC-Ate-010440	Aspergillus terreus	35.61	1.00e-46	179.00
IUUC-Ame-011038	Astyanax mexicanus	71.01	5.00e-129	453.00
IUUC-Bgr-012262	Blumeria graminis	36.79	5.00e-37	147.00
IUUC-Bta-012864	Bos taurus	70.39	2.00e-129	455.00
IUUC-Bci-013986	Botrytis cinerea	37.25	2.00e-37	149.00
IUUC-Bdi-014194	Brachypodium distachyon	46.15	5.00e-50	190.00
IUUC-Bol-016166	Brassica oleracea	48.08	5.00e-51	193.00
IUUC-Bra-017783	Brassica rapa	47.87	1.00e-51	195.00
IUUC-Cja-019488	Callithrix jacchus	70.07	2.00e-129	454.00
IUUC-Cpo-021728	Cavia porcellus	69.90	5.00e-129	453.00
IUUC-Cre-022819	Chlamydomonas reinhardtii	47.83	7.00e-43	166.00
IUUC-Csa-024237	Chlorocebus sabaeus	70.07	2.00e-128	451.00
IUUC-Cho-024544	Choloepus hoffmanni	71.05	1.00e-130	459.00
IUUC-Cin-025549	Ciona intestinalis	43.79	5.00e-73	267.00
IUUC-Cgl-026552	Colletotrichum gloeosporioides	29.85	1.00e-35	143.00
IUUC-Cne-027022	Cryptococcus neoformans	44.00	3.00e-44	171.00
IUUC-Cme-027196	Cyanidioschyzon merolae	43.27	2.00e-41	162.00
IUUC-Dre-027799	Danio rerio	71.38	1.00e-121	428.00
IUUC-Dno-029863	Dasypus novemcinctus	69.08	2.00e-128	451.00
IUUC-Dor-030804	Dipodomys ordii	65.79	2.00e-116	411.00
IUUC-Dse-031494	Dothistroma septosporum	41.83	1.00e-41	163.00
IUUC-Dme-032065	Drosophila melanogaster	40.35	3.00e-69	255.00
IUUC-Ete-033193	Echinops telfairi	69.74	1.00e-128	452.00
IUUC-Eca-033993	Equus caballus	70.39	4.00e-129	454.00
IUUC-Fca-035949	Felis catus	69.74	2.00e-128	451.00
IUUC-Fal-037473	Ficedula albicollis	75.42	2.00e-102	364.00
IUUC-Fox-037779	Fusarium oxysporum	30.28	2.00e-29	122.00
IUUC-Fso-038370	Fusarium solani	36.11	2.00e-27	116.00
IUUC-Gmo-038778	Gadus morhua	57.57	2.00e-93	335.00
IUUC-Ggr-039940	Gaeumannomyces graminis	36.76	2.00e-43	169.00
IUUC-Gga-041102	Gallus gallus	72.04	2.00e-127	448.00
IUUC-Gac-041954	Gasterosteus aculeatus	69.81	7.00e-127	446.00
IUUC-Gma-043608	Glycine max	46.15	3.00e-51	194.00
IUUC-Ggo-044753	Gorilla gorilla	69.08	9.00e-127	446.00
IUUC-Hsa-045714	Homo sapiens	69.31	2.00e-121	428.00
IUUC-Hvu-047600	Hordeum vulgare	47.09	5.00e-50	190.00
IUUC-Itr-048026	Ictidomys tridecemlineatus	70.07	2.00e-129	454.00
IUUC-Kpa-049360	Komagataella pastoris	31.37	3.00e-39	155.00
IUUC-Lch-049900	Latimeria chalumnae	70.39	1.00e-122	432.00
IUUC-Lpe-050984	Leersia perrieri	37.75	7.00e-33	132.00
IUUC-Loc-052567	Lepisosteus oculatus	70.59	5.00e-131	460.00
IUUC-Lma-053247	Leptosphaeria maculans	33.03	6.00e-43	167.00
IUUC-Laf-053361	Loxodonta africana	69.41	2.00e-129	455.00
IUUC-Meu-056137	Macropus eugenii	65.79	3.00e-116	410.00
IUUC-Mor-057191	Magnaporthe oryzae	33.24	1.00e-30	127.00
IUUC-Mpo-057565	Magnaporthe poae	33.97	2.00e-35	142.00
IUUC-Mtr-058196	Medicago truncatula	45.45	5.00e-49	186.00
IUUC-Mla-059096	Melampsora laricipopulina	34.35	3.00e-42	165.00
IUUC-Mga-059489	Meleagris gallopavo	78.39	2.00e-109	387.00
IUUC-Mvi-060300	Microbotryum violaceum	39.72	2.00e-40	159.00
IUUC-Mmr-061618	Microcebus murinus	68.75	4.00e-124	437.00
IUUC-Mdo-061909	Monodelphis domestica	73.03	6.00e-134	470.00
IUUC-Mmu-063434	Mus musculus	70.72	6.00e-130	456.00
IUUC-Mac-064676	Musa acuminata	49.28	2.00e-53	201.00
IUUC-Mpu-066733	Mustela putorius furo	70.07	1.00e-128	452.00
IUUC-Mlu-066990	Myotis lucifugus	67.54	1.00e-124	439.00
IUUC-Nfi-068249	Neosartorya fischeri	32.47	1.00e-44	173.00
IUUC-Ncr-068764	Neurospora crassa	33.44	4.00e-36	144.00
IUUC-Nle-069094	Nomascus leucogenys	69.41	7.00e-127	446.00
IUUC-Oan-073585	Ornithorhynchus anatinus	72.37	5.00e-134	469.00
IUUC-Oba-075949	Oryza barthii	45.67	1.00e-49	188.00
IUUC-Obr-076096	Oryza brachyantha	46.63	1.00e-50	192.00
IUUC-Ogl-077106	Oryza glaberrima	45.19	5.00e-49	186.00
IUUC-Ogu-078024	Oryza glumaepatula	45.67	2.00e-49	188.00
IUUC-Oin-079635	Oryza indica	46.15	3.00e-49	187.00
IUUC-Olo-080299	Oryza longistaminata	45.67	2.00e-49	187.00
IUUC-Ome-081359	Oryza meridionalis	45.67	1.00e-49	189.00
IUUC-Oni-082459	Oryza nivara	45.19	4.00e-49	187.00
IUUC-Opu-083167	Oryza punctata	45.33	1.00e-49	189.00
IUUC-Oru-084577	Oryza rufipogon	46.15	3.00e-49	187.00
IUUC-Osa-085746	Oryza sativa	49.02	3.00e-11	59.30
IUUC-Ola-086890	Oryzias latipes	71.34	7.00e-131	459.00
IUUC-Olu-087585	Ostreococcus lucimarinus	43.07	1.00e-44	172.00
IUUC-Oga-088190	Otolemur garnettii	69.26	9.00e-126	442.00
IUUC-Oar-089631	Ovis aries	71.71	1.00e-130	459.00
IUUC-Pan-091892	Papio anubis	70.07	6.00e-128	450.00
IUUC-Psi-093696	Pelodiscus sinensis	26.23	4.00e-05	43.90
IUUC-Pma-094491	Petromyzon marinus	56.19	2.00e-89	322.00
IUUC-Pno-094993	Phaeosphaeria nodorum	32.24	2.00e-41	162.00
IUUC-Ppa-095791	Physcomitrella patens	48.10	6.00e-52	196.00
IUUC-Pfo-096301	Poecilia formosa	70.39	1.00e-130	459.00
IUUC-Pab-097873	Pongo abelii	70.07	9.00e-128	449.00
IUUC-Pop-099482	Populus trichocarpa	46.38	7.00e-51	192.00
IUUC-Pca-100817	Procavia capensis	68.42	2.00e-122	431.00
IUUC-Ppe-101624	Prunus persica	47.55	4.00e-52	197.00
IUUC-Pva-102120	Pteropus vampyrus	68.09	6.00e-126	443.00
IUUC-Pgr-103368	Puccinia graminis	29.84	5.00e-44	171.00
IUUC-Ptt-103923	Puccinia triticina	38.89	9.00e-43	167.00
IUUC-Pte-104199	Pyrenophora teres	38.54	8.00e-39	154.00
IUUC-Pyt-104502	Pyrenophora triticirepentis	31.83	3.00e-39	155.00
IUUC-Rno-105605	Rattus norvegicus	70.72	9.00e-130	456.00
IUUC-Sce-106323	Saccharomyces cerevisiae	29.67	7.00e-30	124.00
IUUC-Sha-107176	Sarcophilus harrisii	75.67	2.00e-120	424.00
IUUC-Sja-107812	Schizosaccharomyces japonicus	38.18	8.00e-40	157.00
IUUC-Spo-108085	Schizosaccharomyces pombe	29.82	2.00e-40	159.00
IUUC-Smo-109050	Selaginella moellendorffii	45.50	3.00e-49	187.00
IUUC-Sit-110056	Setaria italica	45.89	3.00e-49	187.00
IUUC-Sly-111869	Solanum lycopersicum	48.31	3.00e-42	164.00
IUUC-Stu-112452	Solanum tuberosum	49.03	1.00e-50	192.00
IUUC-Sar-113629	Sorex araneus	70.49	2.00e-48	186.00
IUUC-Sbi-114422	Sorghum bicolor	46.38	1.00e-49	188.00
IUUC-Sre-115105	Sporisorium reilianum	39.11	6.00e-33	134.00
IUUC-Ssc-115553	Sus scrofa	70.07	2.00e-129	454.00
IUUC-Tgu-116921	Taeniopygia guttata	74.68	5.00e-100	356.00
IUUC-Tru-117830	Takifugu rubripes	69.31	1.00e-125	442.00
IUUC-Tsy-119320	Tarsius syrichta	70.07	9.00e-127	446.00
IUUC-Tni-119706	Tetraodon nigroviridis	68.42	2.00e-123	434.00
IUUC-Tca-121238	Theobroma cacao	46.86	8.00e-51	192.00
IUUC-Tae-124711	Triticum aestivum	45.45	2.00e-49	189.00
IUUC-Tme-126966	Tuber melanosporum	35.24	2.00e-52	198.00
IUUC-Tbe-127712	Tupaia belangeri	71.36	1.00e-82	298.00
IUUC-Ttr-129168	Tursiops truncatus	69.08	2.00e-128	451.00
IUUC-Uma-129461	Ustilago maydis	40.89	4.00e-38	152.00
IUUC-Vda-129890	Verticillium dahliae	36.11	2.00e-27	115.00
IUUC-Vpa-130616	Vicugna pacos	68.75	4.00e-127	447.00
IUUC-Vvi-131250	Vitis vinifera	47.83	8.00e-51	192.00
IUUC-Xma-133596	Xiphophorus maculatus	70.39	1.00e-130	459.00
IUUC-Yli-134562	Yarrowia lipolytica	34.14	8.00e-39	154.00
IUUC-Zma-135205	Zea mays	45.41	2.00e-48	184.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence