iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cin-025596

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

EAAA01002706

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCING00000021325.1	ENSCINT00000031490.1	ENSCINP00000035400.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	8.10e-16	57.8	334	379

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl+++  ++ p+ + w Cp C +
   Q: 334  DYCEVCKQGGE----IILCDGCPRAYHLVCLEPP-LDQPPEGS-WPCPTCVK 379
           79*********....9******************.88888887.******75 PP

Organism

Ciona intestinalis

Protein Sequence
(Fasta)

MEQVDSVEIG DDDIEESVEE KPKKKTKKKD RNKKAKKRKR NEDSDIDLRG LSDGNSDAEV 60
AAALALSLDH TANVGEDKPK KKRKKEKKRR ASPDDVSDDA GTSLQATKAE TKTEKDLKSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGTTGGCAT CCTGCATACA GGTCAAACCG GATCAACGTA TTTTTAATTT TTCGCGACTG 60
TCGATAAATT TAAGATCATG GAACAAGTTG ATTCAGTCGA AATAGGAGGT AAGTGATTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028725--CHD4
IPR012958--CHD_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08073--CHDNT
PF00628--PHD

SMART

SM00249--PHD
SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0016581--C:NuRD complex
GO:0005524--F:ATP binding
GO:0003682--F:chromatin binding
GO:0042393--F:histone binding
GO:0016818--F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0000977--F:RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003712--F:transcription cofactor activity
GO:0008270--F:zinc ion binding
GO:0006325--P:chromatin organization
GO:0006355--P:regulation of transcription, DNA-templated
GO:0051225--P:spindle assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000983	Aegilops tauschii	28.15	6.00e-12	65.50
IUUC-Atr-002448	Amborella trichopoda	29.85	2.00e-12	66.20
IUUC-Ani-009451	Aspergillus nidulans	51.06	1.00e-11	63.90
IUUC-Ang-009553	Aspergillus niger	46.30	2.00e-12	66.60
IUUC-Ame-011098	Astyanax mexicanus	53.85	7.00e-63	235.00
IUUC-Cho-024361	Choloepus hoffmanni	53.66	3.00e-61	229.00
IUUC-Csv-025847	Ciona savignyi	74.57	0.00e+00	638.00
IUUC-Cne-026966	Cryptococcus neoformans	39.71	1.00e-10	59.70
IUUC-Dre-027505	Danio rerio	52.40	2.00e-63	237.00
IUUC-Dor-030937	Dipodomys ordii	56.87	2.00e-64	240.00
IUUC-Ete-032262	Echinops telfairi	51.22	3.00e-58	220.00
IUUC-Eeu-034777	Erinaceus europaeus	54.81	8.00e-60	225.00
IUUC-Gmo-038957	Gadus morhua	42.70	6.00e-70	258.00
IUUC-Gma-042754	Glycine max	33.62	3.00e-13	69.70
IUUC-Ggo-044514	Gorilla gorilla	56.87	2.00e-64	240.00
IUUC-Hvu-047053	Hordeum vulgare	28.17	8.00e-12	64.70
IUUC-Lpe-050827	Leersia perrieri	25.00	1.00e-10	60.80
IUUC-Lma-053053	Leptosphaeria maculans	37.04	7.00e-10	58.50
IUUC-Laf-053749	Loxodonta africana	54.76	2.00e-61	230.00
IUUC-Meu-056050	Macropus eugenii	56.19	3.00e-64	239.00
IUUC-Mtr-058183	Medicago truncatula	33.04	8.00e-14	71.20
IUUC-Nle-069824	Nomascus leucogenys	56.87	2.00e-64	240.00
IUUC-Ola-086880	Oryzias latipes	38.19	9.00e-76	278.00
IUUC-Oga-088775	Otolemur garnettii	55.71	5.00e-62	232.00
IUUC-Ptr-090586	Pan troglodytes	57.35	3.00e-64	239.00
IUUC-Pma-094616	Petromyzon marinus	56.52	6.00e-15	73.20
IUUC-Pop-099875	Populus trichocarpa	25.54	1.00e-11	63.20
IUUC-Pca-100559	Procavia capensis	55.71	3.00e-61	229.00
IUUC-Ppe-101950	Prunus persica	29.79	3.00e-12	64.70
IUUC-Pte-104185	Pyrenophora teres	38.78	1.00e-09	58.20
IUUC-Pyt-104775	Pyrenophora triticirepentis	38.78	2.00e-09	57.00
IUUC-Sha-107350	Sarcophilus harrisii	56.19	2.00e-64	240.00
IUUC-Sit-109995	Setaria italica	53.19	1.00e-11	64.70
IUUC-Stu-112309	Solanum tuberosum	54.35	6.00e-11	61.60
IUUC-Sar-113573	Sorex araneus	55.77	7.00e-16	77.80
IUUC-Sbi-114687	Sorghum bicolor	55.32	4.00e-12	65.90
IUUC-Tru-117597	Takifugu rubripes	57.69	3.00e-64	239.00
IUUC-Tni-120289	Tetraodon nigroviridis	55.45	4.00e-65	241.00
IUUC-Tca-121690	Theobroma cacao	27.33	1.00e-11	63.90
IUUC-Tae-123603	Triticum aestivum	29.69	1.00e-12	68.20
IUUC-Tme-127204	Tuber melanosporum	51.11	2.00e-11	63.20
IUUC-Tbe-128117	Tupaia belangeri	50.00	2.00e-43	170.00
IUUC-Ttr-128301	Tursiops truncatus	55.92	7.00e-64	238.00
IUUC-Vpa-130209	Vicugna pacos	55.29	4.00e-59	222.00
IUUC-Vvi-131745	Vitis vinifera	26.96	6.00e-05	42.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence