iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099387

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

F-box family protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTRDRAFT_556407; POPTR_0004s11850g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s11850	POPTR_0004s11850.1	POPTR_0004s11850.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	33.87	1.20e-02	37.00	IUUC-Dme-032049

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSYEEILKVV FPLLEGADLA SCMAVCKQWR DMAQDDYFWK CVCAKRWPSI CKRSDPPTVT 60
YYKLYQTFYK RQHRQILLPP RLSFDNLEFF IDIWTDDKLI FSEVVPGPVL HTGIKSPPPG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAGTACCAC TGTATTTTTC TTAACCTGAC TTTTTCTCTT CTTCTTCTTC CGTTTTTTTA 60
CAAAAAGAAA GCATAAGCAA AGATCTCTCT TTTCTTTATT TTCTTTCTTA ATTTTTTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

Pfam

PF12937--F-box-like

Gene Ontology

GO:0000151--C:ubiquitin ligase complex
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0004s11850g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002230	Ailuropoda melanoleuca	34.55	3.00e-03	36.20
IUUC-Atr-003027	Amborella trichopoda	58.47	1.00e-88	318.00
IUUC-Bol-015482	Brassica oleracea	65.74	4.00e-95	340.00
IUUC-Bra-016658	Brassica rapa	65.34	2.00e-94	337.00
IUUC-Cja-019860	Callithrix jacchus	33.96	3.00e-03	35.40
IUUC-Cfa-020372	Canis familiaris	33.96	2.00e-03	35.40
IUUC-Cpo-022254	Cavia porcellus	33.96	3.00e-03	35.00
IUUC-Csa-023427	Chlorocebus sabaeus	33.96	2.00e-03	35.40
IUUC-Dor-030865	Dipodomys ordii	29.58	2.00e-03	37.00
IUUC-Dme-032049	Drosophila melanogaster	33.87	7.00e-04	37.00
IUUC-Ete-033197	Echinops telfairi	33.96	2.00e-03	35.80
IUUC-Fca-035599	Felis catus	35.85	5.00e-04	37.70
IUUC-Itr-049037	Ictidomys tridecemlineatus	33.96	2.00e-03	35.40
IUUC-Laf-054069	Loxodonta africana	33.96	3.00e-03	35.40
IUUC-Mcc-055362	Macaca mulatta	33.96	3.00e-03	35.40
IUUC-Mvi-060552	Microbotryum violaceum	41.67	1.40e-02	35.00
IUUC-Mmr-061545	Microcebus murinus	33.96	3.00e-03	35.40
IUUC-Mmu-063211	Mus musculus	33.96	3.00e-03	35.40
IUUC-Mac-065212	Musa acuminata	60.41	2.00e-85	308.00
IUUC-Mpu-065969	Mustela putorius furo	33.96	3.00e-03	35.40
IUUC-Nle-069299	Nomascus leucogenys	33.96	3.00e-03	35.40
IUUC-Ocu-074917	Oryctolagus cuniculus	33.96	3.00e-03	35.40
IUUC-Ola-086867	Oryzias latipes	30.16	1.00e-03	36.60
IUUC-Oga-089176	Otolemur garnettii	33.96	1.00e-03	36.60
IUUC-Pan-092627	Papio anubis	33.96	3.00e-03	35.40
IUUC-Pva-102717	Pteropus vampyrus	33.96	3.00e-03	35.40
IUUC-Tre-122078	Trichoderma reesei	26.23	7.00e-03	35.00
IUUC-Tme-127118	Tuber melanosporum	32.39	7.00e-05	41.20
IUUC-Ttr-128569	Tursiops truncatus	33.96	3.00e-03	35.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence