iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099392

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_752170; POPTR_0001s24550g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s24550	POPTR_0001s24550.1	POPTR_0001s24550.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.80e-34	117.1	260	332

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIslelM+dPv++++G+ty+rs+Iekwl  g+ tcP+t+q+lt++  +Pn++lr+li +wce+n++
   Q: 260  IPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLGAGHDTCPKTQQKLTSTAPTPNYVLRSLIAQWCEANGI 332
           89********************************************************************986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEEEENGGGE VVDILIETVN KIASISDYRC TVKKQYCNLA RRLKLLIPML EEIRDSKDSI 60
IPQQTLKALV LLKQALDSAK DLLIFGCEGS KIYLVLEREQ IMNKYHEVTA KLEQALSGIS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCTTTTTTG TCAATCGCAT TAAATTACTG CGGAACTGTT TCTGATCTCA CCCATCGTGT 60
GAAACAGCAC TCGCTGTCTC TGTGAACGGT TTTTTTTTTA ACCGAATCAA TCAACCGCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011029--DEATH-like_dom
IPR008709--Neurochondrin
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF05536--Neurochondrin
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0001s24550g

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence