iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042825

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000842

Gene Name

LOC100777362; GLYMA_09G256200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA09G39220	GLYMA09G39220.1	GLYMA09G39220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.30e-33	115.2	262	333

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p+eflCpI+le+M+dPv++ sG+ty+r+sIekw++s+++tcP+trqpl++ +l Pn +l++li++wce n+
   Q: 262  IPHEFLCPITLEIMTDPVIVTSGQTYERESIEKWFQSNHNTCPKTRQPLEHLSLAPNCALKSLIEEWCENNN 333
           89*******************************************************************986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MARTEEERVV GNESSSDEKN DLVEEIQQVI ESVVQFGDYR RTQRKESHNL VRRFKLMLPL 60
LEELRDLPQP FPEIGVAWLT KLKDALLLAK DLLKLCSQGS KIHLSLETEA VMITFRKVYE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAACATTG TCAGCATGGT TTTCTTAACT CACTTTCCTT GTTTTGTTAA CAATATTTTC 60
TAGCTATTAC TTAGGGACGT GCGTGCATGG CTTTGCATAA GCACGTACGT AGGTAAGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100777362

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000563	Aegilops tauschii	58.07	0.00e+00	669.00
IUUC-Bdi-014836	Brachypodium distachyon	56.72	0.00e+00	671.00
IUUC-Csv-026196	Ciona savignyi	26.91	5.00e-10	60.80
IUUC-Hvu-047325	Hordeum vulgare	56.46	0.00e+00	637.00
IUUC-Lpe-051266	Leersia perrieri	54.08	4.00e-179	621.00
IUUC-Mac-065150	Musa acuminata	50.65	1.00e-166	579.00
IUUC-Oba-075533	Oryza barthii	56.49	0.00e+00	635.00
IUUC-Obr-076561	Oryza brachyantha	57.43	0.00e+00	640.00
IUUC-Ogl-077209	Oryza glaberrima	56.49	0.00e+00	635.00
IUUC-Ogu-078607	Oryza glumaepatula	56.81	0.00e+00	639.00
IUUC-Oin-080162	Oryza indica	56.81	0.00e+00	639.00
IUUC-Olo-080856	Oryza longistaminata	56.88	0.00e+00	637.00
IUUC-Ome-081763	Oryza meridionalis	56.65	0.00e+00	640.00
IUUC-Oni-082893	Oryza nivara	56.81	0.00e+00	639.00
IUUC-Opu-083836	Oryza punctata	59.07	2.00e-180	625.00
IUUC-Oru-085267	Oryza rufipogon	56.81	0.00e+00	639.00
IUUC-Osa-085448	Oryza sativa	56.81	0.00e+00	639.00
IUUC-Pop-099995	Populus trichocarpa	69.04	0.00e+00	840.00
IUUC-Ppe-101219	Prunus persica	73.15	0.00e+00	884.00
IUUC-Sit-110463	Setaria italica	57.86	5.00e-178	617.00
IUUC-Sbi-113821	Sorghum bicolor	60.12	4.00e-176	610.00
IUUC-Tca-121852	Theobroma cacao	67.86	0.00e+00	793.00
IUUC-Tae-125079	Triticum aestivum	56.82	0.00e+00	675.00
IUUC-Tur-126004	Triticum urartu	58.92	0.00e+00	635.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence