iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114677

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G094600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g008240	Sb10g008240.1	Sb10g008240.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.30e-07	31.1	178	220

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+d    ++ ++ lp C H+fh+ C+ +w         + +CP+Cr
   Q: 178  CAICLQDVvsgET-VRKLPkCSHTFHQPCVDRW------FIDHGSCPVCR 220
           ******9988555.999*9**************......999999****8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEVPPLPTAA AEEERRSVAT GPCLPRLLSG VLSGALTGIF AVAGGLTGAF TGALAGRASD 60
SGVLRGAGLG AFAGAVLSIE VLEASRAYWR ADRSSPQSTS SMGDFIEQLL HARFVQEQYE 120

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Nucleotide Sequence
(Fasta)

ATGGAAGTGC CGCCTCTGCC AACGGCGGCG GCGGAAGAGG AGCGCCGGAG CGTAGCGACG 60
GGGCCGTGCC TCCCCAGGCT GCTCTCCGGC GTCCTCTCGG GGGCCCTCAC CGGCATCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_10g008240

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014618	Brachypodium distachyon	77.58	1.00e-77	281.00
IUUC-Hvu-047415	Hordeum vulgare	72.58	9.00e-54	200.00
IUUC-Oba-075137	Oryza barthii	72.59	3.00e-59	220.00
IUUC-Ogu-078195	Oryza glumaepatula	75.37	5.00e-65	239.00
IUUC-Oin-079135	Oryza indica	71.57	2.00e-63	234.00
IUUC-Olo-080783	Oryza longistaminata	65.69	4.00e-60	223.00
IUUC-Ome-081475	Oryza meridionalis	73.10	1.00e-59	221.00
IUUC-Oru-085065	Oryza rufipogon	71.57	2.00e-63	234.00
IUUC-Osa-085437	Oryza sativa	71.57	2.00e-63	234.00
IUUC-Sit-109747	Setaria italica	84.55	6.00e-82	295.00
IUUC-Tae-124714	Triticum aestivum	79.41	3.00e-70	256.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence