iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099798

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

UBIQUITIN-SPECIFIC PROTEASE 4 family protein

Genbank Nucleotide ID

CM000343

Gene Name

POPTRDRAFT_718773; POPTR_0007s05400g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s05400	POPTR_0007s05400.1	POPTR_0007s05400.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.20e-99	334.9	23	362

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgyeq 89
           +Gl+N+gNtCY+NSvLQ+L+++ ++re+lle +    n +n  + +++ll++l++lf+++   k+k+++++p+++++ lkk +e f++y++
   Q: 23   FGLENFGNTCYCNSVLQALYFCAPFREQLLE-YYA--NSKNIGDAEENLLTCLADLFTQISsqKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
           6******************************.444..44566899***************98899999*********************** PP
   S: 90   qDaqEflaflldqleeelkkeknkpkeeeeeedkselsde....aeekkkkknk.......slisdlFqgqlksqikclecdnvssreepf 169
           qDa+Efl+fll++l + l+ke++  k+e+e ++  e++ +    a+ +             ++++++Fqg l+++++cl+c++v+ r+e+f
   Q: 111  QDAHEFLNFLLNELVDILEKEAQAVKSETETSSPPEKTANgpkhAQAN-----GvskeplvTWVHKNFQGILTNETRCLQCETVTARDETF 196
           ******************874444444443333222222222222222.....13344688****************************** PP
   S: 170  ldlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLd 260
           +dlsl++++++     s+++cL++f+++e+l+ e+k++c+kc+++qea+k++k+kk P++L++hLkRf++ e+ ++ +k++ +v fpleL+
   Q: 197  FDLSLDIEQNS-----SITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELK 282
           ***********.....9************************************************************************** PP
   S: 261  lspfctspeekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetg.........staYvlfYkr 337
           ls+ +++       + +Y+L+avvvH G ++++GHYv++vk+ +++Wl fdD++V+ ++e+ v+++ g         + +Y+lfY++
   Q: 283  LSNTVED------ADIEYSLFAVVVHVGsGPNHGHYVSLVKS-HNHWLFFDDENVEMIDESAVQTFFGsaqeyssntDHGYILFYES 362
           **77776......3799*************************.889*******************999*****************85 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGAAGSKLEK ALGDQFPEGE RYFGLENFGN TCYCNSVLQA LYFCAPFREQ LLEYYANSKN 60
IGDAEENLLT CLADLFTQIS SQKKKTGVIA PKRFVQRLKK QNELFRSYMH QDAHEFLNFL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATTTTTCTC TTGTTTTCTT CTCTCTCTCT CTCTCACAAA ACCATACCAT ACCAGACAAA 60
CACAAACCCT CGTTCCGTTC CTTTCCTTTC CTTCCACTAC CAACAAAATC ATAAAACAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0007s05400g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000934	Aegilops tauschii	78.80	0.00e+00	632.00
IUUC-Aml-002353	Ailuropoda melanoleuca	60.11	6.00e-124	436.00
IUUC-Apl-003380	Anas platyrhynchos	58.74	4.00e-122	430.00
IUUC-Aca-005031	Anolis carolinensis	59.29	4.00e-125	440.00
IUUC-Ago-007871	Ashbya gossypii	37.17	7.00e-49	188.00
IUUC-Acl-008239	Aspergillus clavatus	48.29	5.00e-75	275.00
IUUC-Afu-008816	Aspergillus fumigatus	48.10	4.00e-76	278.00
IUUC-Bgr-012071	Blumeria graminis	46.47	2.00e-78	286.00
IUUC-Bta-013023	Bos taurus	60.00	2.00e-123	434.00
IUUC-Bci-013837	Botrytis cinerea	44.84	2.00e-74	273.00
IUUC-Bdi-014887	Brachypodium distachyon	86.58	0.00e+00	653.00
IUUC-Bra-016956	Brassica rapa	88.11	0.00e+00	677.00
IUUC-Cel-018379	Caenorhabditis elegans	49.38	1.00e-109	389.00
IUUC-Cja-018956	Callithrix jacchus	60.00	3.00e-123	434.00
IUUC-Cpo-022443	Cavia porcellus	60.00	3.00e-123	434.00
IUUC-Cre-022711	Chlamydomonas reinhardtii	62.87	2.00e-124	438.00
IUUC-Csa-023841	Chlorocebus sabaeus	60.11	4.00e-124	437.00
IUUC-Csv-025828	Ciona savignyi	45.98	2.00e-100	358.00
IUUC-Cgl-026611	Colletotrichum gloeosporioides	43.17	5.00e-74	271.00
IUUC-Dno-029209	Dasypus novemcinctus	60.00	5.00e-123	433.00
IUUC-Dor-030972	Dipodomys ordii	57.63	2.00e-84	305.00
IUUC-Dse-031470	Dothistroma septosporum	46.39	1.00e-72	267.00
IUUC-Dme-032038	Drosophila melanogaster	60.30	2.00e-71	262.00
IUUC-Eca-033721	Equus caballus	59.56	7.00e-123	432.00
IUUC-Eeu-034916	Erinaceus europaeus	59.61	3.00e-99	354.00
IUUC-Fca-036299	Felis catus	60.00	6.00e-123	433.00
IUUC-Fal-036833	Ficedula albicollis	58.90	8.00e-123	432.00
IUUC-Fox-037682	Fusarium oxysporum	44.55	1.00e-74	274.00
IUUC-Gmo-038763	Gadus morhua	59.29	6.00e-127	446.00
IUUC-Ggr-039806	Gaeumannomyces graminis	44.84	7.00e-77	281.00
IUUC-Gga-041157	Gallus gallus	59.02	1.00e-122	432.00
IUUC-Ggo-044659	Gorilla gorilla	60.00	5.00e-123	433.00
IUUC-Hsa-046156	Homo sapiens	60.11	4.00e-124	437.00
IUUC-Hvu-047692	Hordeum vulgare	83.11	0.00e+00	631.00
IUUC-Itr-048157	Ictidomys tridecemlineatus	60.11	4.00e-124	437.00
IUUC-Kpa-049250	Komagataella pastoris	44.52	3.00e-68	252.00
IUUC-Lch-049969	Latimeria chalumnae	59.02	5.00e-121	426.00
IUUC-Lpe-051368	Leersia perrieri	84.89	0.00e+00	652.00
IUUC-Loc-052479	Lepisosteus oculatus	59.67	1.00e-125	442.00
IUUC-Lma-053300	Leptosphaeria maculans	44.27	7.00e-74	271.00
IUUC-Laf-054085	Loxodonta africana	60.11	4.00e-124	437.00
IUUC-Mcc-055566	Macaca mulatta	60.00	3.00e-123	434.00
IUUC-Mor-057072	Magnaporthe oryzae	44.62	1.00e-76	280.00
IUUC-Mpo-057424	Magnaporthe poae	44.98	9.00e-78	284.00
IUUC-Mga-059575	Meleagris gallopavo	58.90	1.00e-121	429.00
IUUC-Mvi-060357	Microbotryum violaceum	52.61	4.00e-76	279.00
IUUC-Mmr-060751	Microcebus murinus	59.56	3.00e-125	440.00
IUUC-Mdo-062579	Monodelphis domestica	59.56	6.00e-124	436.00
IUUC-Mmu-063611	Mus musculus	60.11	4.00e-124	437.00
IUUC-Mac-064964	Musa acuminata	87.40	0.00e+00	673.00
IUUC-Mpu-066038	Mustela putorius furo	60.00	5.00e-123	433.00
IUUC-Mlu-068183	Myotis lucifugus	60.00	3.00e-123	434.00
IUUC-Nfi-068611	Neosartorya fischeri	48.10	7.00e-76	278.00
IUUC-Ncr-068699	Neurospora crassa	43.34	3.00e-75	276.00
IUUC-Nle-069330	Nomascus leucogenys	60.11	4.00e-124	437.00
IUUC-Opr-070980	Ochotona princeps	59.45	3.00e-123	434.00
IUUC-Oan-073372	Ornithorhynchus anatinus	58.63	1.00e-122	432.00
IUUC-Ocu-074923	Oryctolagus cuniculus	59.73	2.00e-122	431.00
IUUC-Oba-075620	Oryza barthii	86.58	0.00e+00	645.00
IUUC-Obr-076208	Oryza brachyantha	86.58	0.00e+00	645.00
IUUC-Ogl-077763	Oryza glaberrima	86.58	0.00e+00	645.00
IUUC-Ogu-078571	Oryza glumaepatula	86.30	0.00e+00	640.00
IUUC-Olo-080882	Oryza longistaminata	85.16	0.00e+00	654.00
IUUC-Ome-081549	Oryza meridionalis	85.16	0.00e+00	654.00
IUUC-Oni-082982	Oryza nivara	85.16	0.00e+00	654.00
IUUC-Opu-084002	Oryza punctata	86.58	0.00e+00	647.00
IUUC-Olu-087809	Ostreococcus lucimarinus	51.38	2.00e-93	335.00
IUUC-Oga-088073	Otolemur garnettii	59.56	7.00e-123	432.00
IUUC-Oar-089248	Ovis aries	60.00	5.00e-123	433.00
IUUC-Ptr-090814	Pan troglodytes	60.11	4.00e-124	437.00
IUUC-Pan-091753	Papio anubis	60.11	4.00e-124	437.00
IUUC-Psi-094012	Pelodiscus sinensis	58.90	8.00e-122	429.00
IUUC-Pma-094388	Petromyzon marinus	60.16	6.00e-124	436.00
IUUC-Pno-095044	Phaeosphaeria nodorum	46.82	6.00e-74	271.00
IUUC-Pab-098594	Pongo abelii	60.11	5.00e-124	436.00
IUUC-Pca-100835	Procavia capensis	54.44	1.00e-99	355.00
IUUC-Pva-102892	Pteropus vampyrus	60.00	4.00e-123	433.00
IUUC-Pgr-103306	Puccinia graminis	51.29	1.00e-90	327.00
IUUC-Pte-104356	Pyrenophora teres	43.96	3.00e-74	272.00
IUUC-Pyt-104709	Pyrenophora triticirepentis	46.54	7.00e-74	271.00
IUUC-Rno-104909	Rattus norvegicus	59.56	4.00e-124	437.00
IUUC-Sce-106367	Saccharomyces cerevisiae	39.09	1.00e-59	224.00
IUUC-Sha-107400	Sarcophilus harrisii	59.45	8.00e-123	432.00
IUUC-Sja-107684	Schizosaccharomyces japonicus	43.28	5.00e-65	241.00
IUUC-Smo-109064	Selaginella moellendorffii	80.71	6.00e-170	589.00
IUUC-Sit-109700	Setaria italica	87.12	0.00e+00	652.00
IUUC-Sly-111210	Solanum lycopersicum	91.46	0.00e+00	701.00
IUUC-Stu-112398	Solanum tuberosum	89.07	0.00e+00	683.00
IUUC-Sbi-114562	Sorghum bicolor	86.85	0.00e+00	663.00
IUUC-Sre-115197	Sporisorium reilianum	48.77	2.00e-77	283.00
IUUC-Ssc-115550	Sus scrofa	60.00	3.00e-123	434.00
IUUC-Tgu-116800	Taeniopygia guttata	59.02	1.00e-122	432.00
IUUC-Tru-118613	Takifugu rubripes	59.02	2.00e-126	445.00
IUUC-Tni-120293	Tetraodon nigroviridis	59.02	2.00e-126	445.00
IUUC-Tca-121329	Theobroma cacao	95.08	0.00e+00	732.00
IUUC-Tre-122226	Trichoderma reesei	44.77	5.00e-76	278.00
IUUC-Tae-125611	Triticum aestivum	86.85	0.00e+00	653.00
IUUC-Tur-126331	Triticum urartu	86.30	0.00e+00	649.00
IUUC-Ttr-129083	Tursiops truncatus	59.29	1.00e-124	438.00
IUUC-Uma-129409	Ustilago maydis	49.30	2.00e-77	284.00
IUUC-Vda-129736	Verticillium dahliae	38.91	1.00e-57	217.00
IUUC-Vpa-130590	Vicugna pacos	56.56	3.00e-112	397.00
IUUC-Vvi-131371	Vitis vinifera	94.59	0.00e+00	729.00
IUUC-Xtr-132082	Xenopus tropicalis	57.92	2.00e-122	431.00
IUUC-Yli-134632	Yarrowia lipolytica	45.18	5.00e-75	275.00
IUUC-Zma-135752	Zea mays	86.58	0.00e+00	648.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence