iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043920

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000851

Gene Name

LOC100811250; GLYMA_18G055200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA18G06200	GLYMA18G06200.2	GLYMA18G06200.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.30e-29	103.6	239	311

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+Cp+slelM+dPv+++sG+ty+r+ I+ w++ g + cP+trq+l ++ l+Pn+t+++li +wce+n++
   Q: 239  IPADFCCPLSLELMTDPVIVASGQTYERAFIKNWIDLGLTVCPKTRQTLVHTHLIPNYTVKALIANWCESNNV 311
           8********************************************************************9986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MGVMEISLLK MIVNGMSSFL HLSFSGNMNS EPVSKYYQKA EEIHKLLKPI IDAIVNPELA 60
SDEVLNKILE EIGFAVNELK EHVENWHLLS SKVYFVMQVE PLISRIRTSG LNIFQQLKDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCATGTGAT TATGATCATT AATCCTAATT AAAAAAATCC AGCAAGAGAA GTTGGGATTC 60
AACAAAATAA TAATAATAAA AAAACTCGAA CAGAAGAGAA GACGGAGTCT CTAAAATTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100811250

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000760	Aegilops tauschii	48.58	0.00e+00	647.00
IUUC-Atr-002793	Amborella trichopoda	55.41	0.00e+00	822.00
IUUC-Aly-006261	Arabidopsis lyrata	60.34	0.00e+00	887.00
IUUC-Ath-006925	Arabidopsis thaliana	59.56	0.00e+00	881.00
IUUC-Bdi-014197	Brachypodium distachyon	52.57	0.00e+00	687.00
IUUC-Bra-018049	Brassica rapa	55.73	0.00e+00	801.00
IUUC-Hvu-047089	Hordeum vulgare	51.06	0.00e+00	720.00
IUUC-Lch-050378	Latimeria chalumnae	29.65	9.00e-11	63.20
IUUC-Lpe-051326	Leersia perrieri	51.82	0.00e+00	683.00
IUUC-Mtr-057910	Medicago truncatula	80.98	0.00e+00	1250.00
IUUC-Oba-075484	Oryza barthii	53.30	0.00e+00	653.00
IUUC-Obr-076317	Oryza brachyantha	52.54	0.00e+00	661.00
IUUC-Ogl-077857	Oryza glaberrima	53.30	0.00e+00	654.00
IUUC-Ogu-078826	Oryza glumaepatula	51.65	0.00e+00	657.00
IUUC-Oin-079538	Oryza indica	51.95	0.00e+00	656.00
IUUC-Olo-080425	Oryza longistaminata	51.51	0.00e+00	628.00
IUUC-Ome-081524	Oryza meridionalis	52.82	0.00e+00	655.00
IUUC-Oni-082077	Oryza nivara	51.65	0.00e+00	655.00
IUUC-Opu-083165	Oryza punctata	53.19	0.00e+00	660.00
IUUC-Oru-085180	Oryza rufipogon	53.12	0.00e+00	663.00
IUUC-Osa-085315	Oryza sativa	52.82	0.00e+00	663.00
IUUC-Pop-099220	Populus trichocarpa	70.22	0.00e+00	767.00
IUUC-Ppe-101233	Prunus persica	66.31	6.00e-143	501.00
IUUC-Sit-110349	Setaria italica	52.25	0.00e+00	693.00
IUUC-Sly-111082	Solanum lycopersicum	59.71	0.00e+00	863.00
IUUC-Sbi-114085	Sorghum bicolor	72.65	1.00e-128	453.00
IUUC-Tca-121129	Theobroma cacao	70.39	0.00e+00	1076.00
IUUC-Tae-125886	Triticum aestivum	51.43	0.00e+00	710.00
IUUC-Tur-126525	Triticum urartu	45.94	0.00e+00	627.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence