iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042897

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitinyl hydrolase 1

Genbank Nucleotide ID

CM000850

Gene Name

LOC100796312; GLYMA_17G109100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA17G11760	GLYMA17G11760.1	GLYMA17G11760.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.00e-81	275.4	202	578

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle..kkkeklneenp................kepkgellkslqklfeelwkskkkavsprellkal 77
           Gl+NlgNtC+mNSvLQ+L+++p+lr+++l+  +++  ++++n+                k+  ++l++ +  +f+++ ++++  +sp ++l + 
   Q: 202  GLNNLGNTCFMNSVLQALLHTPPLRNYFLSdrHNRYFCQKKNNgdvdgalkrsggnngnKNARTCLACDMDAMFSSVFSGDRAPYSPAKFLYSW 295
           9*****************************8756666777776777777777777666666677****************************** PP
   S: 78   kkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfld 171
           ++ a ++ +yeqqDa+Ef+  +ld+++e+++k                  + ++ ++ +   ++ +++F g l+s+++c +c+ +s++++p +d
   Q: 296  WQHAANLATYEQQDAHEFFISMLDGIHEKVEK-----------------VRCKPHSEGNGDCCIAHKVFSGILRSDVTCMACGFTSTTYDPCID 372
           ******************************44.................2335677889999******************************** PP
   S: 172  lslpvpgkeetkke..........................slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsf 239
           +sl+++ ++  +++                          +l  cL+ ft++e+l +++k++c++c+ +qe+ k+++++klP v ++h+kRf+ 
   Q: 373  ISLDLEPNQGGSTKittassnhscngepdcmnssqncgtsTLMGCLKRFTRAERLGSDQKFFCRQCQVRQETLKQMSIRKLPLVSCFHIKRFEH 466
           ******9998888899****************************************************************************** PP
   S: 240  seeqksrekinkkvefpleLdlspfcts..................peekqkekkkYeLiavvvHsGslssGHYvayvknekgkWllfdDskVt 315
           s+++k+++k++++++fp +Ld+sp+++s                  p+ +++ + ++eL+avv HsG+l+ GHYv+y +  +++W+++dD  Vt
   Q: 467  SSTRKMSRKVDRYLQFPFSLDMSPYLSStilrnrfgnrifpfdgdePDASDELCSEFELFAVVTHSGKLDAGHYVTYLRL-SNQWYKCDDAWVT 559
           ****************************9999999999999988886666666***************************.999********** PP
   S: 316  evkeeevleetgstaYvlfYkr 337
           +v+e+ v     ++ Y++fY +
   Q: 560  QVDENIVRA---AQCYMMFYVQ 578
           *********...********76 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSSKINGQIS PQPCPHLAEF RRTSAKPFLA LHNCLRIKPP GGRAALRRDP DEVPRCCSCG 60
LSAPSRLYAC VTCAAIFCHS STGVGLSHAA AHAASMPPGH QIAVDVDRAE LFCCACHDQV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTTGAA TATATTTTTA TTGTTTACAA TACAAATATA GAAAGCAGAG TGTATAAAAT 60
AAAGCAGTGA AGCAGCGAGA GTGAGAGAAG CGAGGCAGAA GCTGAACACT TATTAAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

gmx:100796312

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000393	Aegilops tauschii	60.90	2.00e-134	473.00
IUUC-Aml-001343	Ailuropoda melanoleuca	33.67	9.00e-89	320.00
IUUC-Atr-002653	Amborella trichopoda	59.12	0.00e+00	663.00
IUUC-Apl-003433	Anas platyrhynchos	35.78	4.00e-86	311.00
IUUC-Aca-005347	Anolis carolinensis	34.48	9.00e-87	314.00
IUUC-Ame-011253	Astyanax mexicanus	33.64	4.00e-76	278.00
IUUC-Bta-013303	Bos taurus	34.54	6.00e-90	324.00
IUUC-Bdi-014171	Brachypodium distachyon	58.90	6.00e-179	620.00
IUUC-Cja-019283	Callithrix jacchus	36.78	2.00e-85	309.00
IUUC-Cfa-021239	Canis familiaris	35.22	7.00e-87	314.00
IUUC-Cpo-022354	Cavia porcellus	34.54	6.00e-91	328.00
IUUC-Csa-023145	Chlorocebus sabaeus	34.54	3.00e-90	325.00
IUUC-Cne-027085	Cryptococcus neoformans	31.96	6.00e-67	248.00
IUUC-Dre-027433	Danio rerio	35.85	4.00e-88	318.00
IUUC-Dno-030095	Dasypus novemcinctus	35.22	1.00e-86	313.00
IUUC-Dor-030832	Dipodomys ordii	39.79	1.00e-37	150.00
IUUC-Dme-032074	Drosophila melanogaster	31.79	6.00e-73	268.00
IUUC-Eca-033736	Equus caballus	35.45	4.00e-87	315.00
IUUC-Eeu-034814	Erinaceus europaeus	40.81	6.00e-43	168.00
IUUC-Fca-035861	Felis catus	35.40	5.00e-87	315.00
IUUC-Fal-037645	Ficedula albicollis	35.82	7.00e-86	311.00
IUUC-Ggo-044409	Gorilla gorilla	34.54	4.00e-90	325.00
IUUC-Hsa-046521	Homo sapiens	34.54	5.00e-90	325.00
IUUC-Hvu-047739	Hordeum vulgare	63.42	1.00e-145	508.00
IUUC-Itr-048375	Ictidomys tridecemlineatus	34.72	7.00e-91	327.00
IUUC-Lpe-050969	Leersia perrieri	63.99	2.00e-154	538.00
IUUC-Loc-052765	Lepisosteus oculatus	32.43	2.00e-72	266.00
IUUC-Laf-053571	Loxodonta africana	35.40	3.00e-87	315.00
IUUC-Mcc-055166	Macaca mulatta	34.54	3.00e-90	325.00
IUUC-Mtr-057769	Medicago truncatula	81.02	0.00e+00	944.00
IUUC-Mga-059709	Meleagris gallopavo	35.78	4.00e-86	311.00
IUUC-Mvi-060530	Microbotryum violaceum	32.33	5.00e-49	188.00
IUUC-Mmr-060988	Microcebus murinus	34.54	2.00e-90	326.00
IUUC-Mmu-063829	Mus musculus	34.54	3.00e-90	325.00
IUUC-Mpu-066687	Mustela putorius furo	34.89	5.00e-89	321.00
IUUC-Opr-070469	Ochotona princeps	35.66	9.00e-61	227.00
IUUC-Ont-071961	Oreochromis niloticus	33.39	2.00e-87	316.00
IUUC-Oan-073565	Ornithorhynchus anatinus	34.53	9.00e-83	300.00
IUUC-Oba-075688	Oryza barthii	55.92	8.00e-164	570.00
IUUC-Obr-076652	Oryza brachyantha	66.41	6.00e-150	523.00
IUUC-Ogl-077910	Oryza glaberrima	57.80	3.00e-173	601.00
IUUC-Ogu-078479	Oryza glumaepatula	57.98	8.00e-174	603.00
IUUC-Oin-079697	Oryza indica	63.32	1.00e-150	526.00
IUUC-Olo-080811	Oryza longistaminata	67.45	2.00e-113	401.00
IUUC-Ome-081706	Oryza meridionalis	60.95	2.00e-170	592.00
IUUC-Oni-083070	Oryza nivara	57.63	1.00e-172	599.00
IUUC-Opu-083605	Oryza punctata	65.53	9.00e-142	496.00
IUUC-Oru-084522	Oryza rufipogon	57.80	3.00e-173	601.00
IUUC-Osa-085351	Oryza sativa	63.30	1.00e-154	539.00
IUUC-Ola-086743	Oryzias latipes	41.79	4.00e-81	295.00
IUUC-Oga-089131	Otolemur garnettii	34.89	3.00e-91	329.00
IUUC-Oar-089319	Ovis aries	35.40	7.00e-87	314.00
IUUC-Ptr-090783	Pan troglodytes	34.98	7.00e-88	317.00
IUUC-Pan-092927	Papio anubis	34.54	3.00e-90	325.00
IUUC-Psi-093670	Pelodiscus sinensis	35.78	3.00e-86	311.00
IUUC-Pma-094323	Petromyzon marinus	33.21	2.00e-67	249.00
IUUC-Ppa-095413	Physcomitrella patens	48.96	1.00e-153	536.00
IUUC-Pfo-096473	Poecilia formosa	34.60	3.00e-91	328.00
IUUC-Pab-097612	Pongo abelii	34.54	5.00e-90	325.00
IUUC-Pop-099558	Populus trichocarpa	70.86	0.00e+00	820.00
IUUC-Ppe-102020	Prunus persica	77.44	0.00e+00	908.00
IUUC-Pgr-103657	Puccinia graminis	26.81	4.00e-33	136.00
IUUC-Rno-105247	Rattus norvegicus	34.54	2.00e-90	326.00
IUUC-Sha-107538	Sarcophilus harrisii	39.83	4.00e-44	171.00
IUUC-Smo-109595	Selaginella moellendorffii	49.24	4.00e-145	508.00
IUUC-Sit-109716	Setaria italica	60.04	4.00e-175	607.00
IUUC-Sbi-114205	Sorghum bicolor	57.71	2.00e-174	605.00
IUUC-Sre-115195	Sporisorium reilianum	28.85	2.00e-48	187.00
IUUC-Tgu-116938	Taeniopygia guttata	35.59	7.00e-87	314.00
IUUC-Tru-118304	Takifugu rubripes	34.42	2.00e-90	326.00
IUUC-Tni-120661	Tetraodon nigroviridis	34.19	2.00e-90	326.00
IUUC-Tca-121716	Theobroma cacao	71.50	0.00e+00	842.00
IUUC-Tae-125608	Triticum aestivum	60.86	0.00e+00	659.00
IUUC-Ttr-129018	Tursiops truncatus	38.13	8.00e-83	300.00
IUUC-Uma-129455	Ustilago maydis	30.04	5.00e-30	126.00
IUUC-Xtr-132444	Xenopus tropicalis	34.37	4.00e-88	318.00
IUUC-Yli-134357	Yarrowia lipolytica	29.29	3.00e-45	176.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence