iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-100076

Ensembl Protein ID

POPTR_0002s13380.1

UniProt Accession

B9GP21; B9GP21_POPTR

Genbank Protein ID

EEE80487.2; ERP64316.1

Protein Name

Ubiquitin interaction motif-containing family protein

Genbank Nucleotide ID

CM000338; CM000338

Gene Name

POPTRDRAFT_798914; POPTR_0002s13380g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s13380	POPTR_0002s13380.1	POPTR_0002s13380.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UIM	6.40e-07	29.8	94	110
UBD/Alpha-Helix/UIM	8.1e-05	12.9	64	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlqEe 17
           +Ede+L++Al++Sl++e
   Q: 94   KEDEQLAKALQESLSVE 110
           69************997 PP

UBD/Alpha-Helix/UIM

   S: 2    EdeeLqlAlalSlqEee 18
            +e++ +A+alSl E +
   Q: 64   NEEDIDRAIALSLLEDN 80
           69************986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MLRCPIKKFV DDEQITIHVM GWLSKIFKGS NHNISEGHYY GNYGQDANYN APSTSGEAYL 60
EQENEEDIDR AIALSLLEDN HIGKNVADVE IQLKEDEQLA KALQESLSVE SPPRHGIPYQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGTTGAATA GGAAAGCAAT ATAGTTACAG AGTTGGTTAT CTTAGTACTG GAATTAAGTT 60
TCCTGGAAAC ATTAATCACT GGGTTGCAGG GATGCTTCGC TGTCCTAGTC ATATTGAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022087--DA1-like
IPR003903--UIM_dom
IPR001781--Znf_LIM

PROSITE

PS00478--LIM_DOMAIN_1
PS50023--LIM_DOMAIN_2
PS50330--UIM

Pfam

PF12315--DA1-like
PF00412--LIM

SMART

SM00132--LIM
SM00726--UIM

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0002s13380g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000888	Aegilops tauschii	68.03	0.00e+00	628.00
IUUC-Atr-002465	Amborella trichopoda	66.87	0.00e+00	672.00
IUUC-Bdi-014789	Brachypodium distachyon	67.34	0.00e+00	667.00
IUUC-Bra-016788	Brassica rapa	50.00	2.00e-95	342.00
IUUC-Cel-018413	Caenorhabditis elegans	34.29	1.00e-03	37.00
IUUC-Cfa-020384	Canis familiaris	31.67	9.00e-05	40.00
IUUC-Csv-026030	Ciona savignyi	33.90	1.00e-05	42.70
IUUC-Lpe-050858	Leersia perrieri	66.02	0.00e+00	674.00
IUUC-Mvi-060250	Microbotryum violaceum	39.39	6.00e-01	30.00
IUUC-Mmr-061438	Microcebus murinus	47.50	6.00e-07	48.90
IUUC-Mac-065516	Musa acuminata	57.32	1.00e-49	188.00
IUUC-Oba-075285	Oryza barthii	69.40	0.00e+00	679.00
IUUC-Ogl-077044	Oryza glaberrima	69.40	0.00e+00	679.00
IUUC-Ogu-078868	Oryza glumaepatula	69.40	0.00e+00	679.00
IUUC-Oin-079737	Oryza indica	72.56	0.00e+00	648.00
IUUC-Olo-080337	Oryza longistaminata	64.75	0.00e+00	671.00
IUUC-Oni-082197	Oryza nivara	69.40	0.00e+00	679.00
IUUC-Opu-083815	Oryza punctata	64.62	0.00e+00	665.00
IUUC-Oru-085246	Oryza rufipogon	69.40	0.00e+00	679.00
IUUC-Osa-086082	Oryza sativa	69.40	0.00e+00	679.00
IUUC-Sit-110147	Setaria italica	65.63	0.00e+00	678.00
IUUC-Sly-111689	Solanum lycopersicum	71.78	0.00e+00	709.00
IUUC-Stu-112186	Solanum tuberosum	71.78	0.00e+00	709.00
IUUC-Sbi-114752	Sorghum bicolor	68.79	0.00e+00	690.00
IUUC-Ssc-115811	Sus scrofa	25.40	3.40e-01	28.90
IUUC-Tae-125101	Triticum aestivum	66.73	0.00e+00	675.00
IUUC-Tur-126006	Triticum urartu	65.08	1.00e-179	622.00
IUUC-Vvi-131286	Vitis vinifera	73.75	0.00e+00	721.00
IUUC-Xtr-131827	Xenopus tropicalis	30.00	3.00e-05	41.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence