iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114811

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G268200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g030310	Sb10g030310.1	Sb10g030310.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-06	30.0	201	243

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+df   ++ +++lp C Hvfh  C+  w        k+ +CPlCr
   Q: 201  CSVCLQDFqvgEK-VRSLPdCWHVFHVPCIDGW------LIKHGSCPLCR 243
           ********99555.*******************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDPSGGAFLP QLQAGSSSFP RSSSNTSLAR TGSAGRGRGG TRGRKMMRRV CRGVITFIFA 60
IAGLFLGAVT GGLIGLATES GLFRGTGIGA ITGALVSIEV VDSSIRLWQS RRSGIWSILY 120

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Nucleotide Sequence
(Fasta)

AGAGGCGACG GGTTGGTTGG CGCCATAAAT TCCTCGCCAC CACCGCTCGA CCTACCATAC 60
CCGTCCGTCC TAGCTCATCC GAGCCTGCCC TCCGATCCCC TCCATCACAG CAGCTGCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_10g030310

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000505	Aegilops tauschii	94.27	1.00e-103	368.00
IUUC-Bdi-014992	Brachypodium distachyon	92.54	2.00e-107	380.00
IUUC-Fox-038011	Fusarium oxysporum	34.69	7.00e-15	74.30
IUUC-Ggr-040021	Gaeumannomyces graminis	64.58	9.00e-13	67.40
IUUC-Lpe-051237	Leersia perrieri	81.12	4.00e-108	382.00
IUUC-Mpo-057522	Magnaporthe poae	60.71	2.00e-13	69.70
IUUC-Mac-064778	Musa acuminata	59.70	4.00e-67	246.00
IUUC-Oba-075390	Oryza barthii	82.11	2.00e-109	386.00
IUUC-Obr-076264	Oryza brachyantha	81.30	4.00e-108	382.00
IUUC-Ogl-077598	Oryza glaberrima	82.11	2.00e-109	386.00
IUUC-Ogu-078526	Oryza glumaepatula	82.11	2.00e-109	386.00
IUUC-Oin-079706	Oryza indica	82.11	2.00e-109	386.00
IUUC-Olo-080832	Oryza longistaminata	82.11	2.00e-109	386.00
IUUC-Ome-081142	Oryza meridionalis	82.11	2.00e-109	386.00
IUUC-Oni-082117	Oryza nivara	82.11	2.00e-109	386.00
IUUC-Opu-083964	Oryza punctata	81.71	7.00e-109	385.00
IUUC-Oru-084552	Oryza rufipogon	82.11	2.00e-109	386.00
IUUC-Osa-085950	Oryza sativa	82.11	2.00e-109	386.00
IUUC-Sit-110653	Setaria italica	97.97	1.00e-111	394.00
IUUC-Tae-125745	Triticum aestivum	94.27	3.00e-104	370.00
IUUC-Tur-126195	Triticum urartu	79.17	3.00e-82	296.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence