iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114365

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G373100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g035440	Sb01g035440.1	Sb01g035440.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.80e-08	35.0	147	189

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iC+e ++d    + vl+CgH++h++C++ +     ++  +f+CP+C
   Q: 147  CPICYEYMFDSlreTSVLRCGHTMHLHCFHEM-----LKHDKFSCPIC 189
           ******9966522255899**********666.....5999******* PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MELDAEARRG FARMGFGCKH YRRRCRIRAP CCGDVFHCRH CHNESTKDGH ELDRHAVQSV 60
ICLVCDTEQP IAQVCCNCGV CMGEYFCRKC NFLDDDVDKE QFHCDDCGIC RVGGKDNFFH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCTCG ACGCCGAGGC GCGCCGCGGG TTCGCCAGGA TGGGCTTCGG GTCCGTGCTG 60
CTCTGTTTGC ACAGCTGAAG CTGCTGCTGC TTCTTTTGCT CGCCGTTCGT TTGCTCACCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004039--Rubredoxin-type_fold
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF05495--zf-CHY
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_01g035440

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014460	Brachypodium distachyon	81.68	8.00e-125	438.00
IUUC-Hvu-047741	Hordeum vulgare	84.44	9.00e-129	451.00
IUUC-Lpe-051494	Leersia perrieri	85.33	3.00e-130	456.00
IUUC-Oba-075829	Oryza barthii	85.71	1.00e-131	461.00
IUUC-Ogl-077824	Oryza glaberrima	85.71	1.00e-131	461.00
IUUC-Ogu-078026	Oryza glumaepatula	85.21	1.00e-129	454.00
IUUC-Oin-079551	Oryza indica	85.71	1.00e-131	461.00
IUUC-Olo-080914	Oryza longistaminata	80.31	8.00e-121	425.00
IUUC-Ome-081783	Oryza meridionalis	85.71	2.00e-131	460.00
IUUC-Oni-082270	Oryza nivara	74.15	7.00e-86	311.00
IUUC-Opu-083335	Oryza punctata	78.09	7.00e-117	412.00
IUUC-Oru-085157	Oryza rufipogon	85.71	1.00e-131	461.00
IUUC-Osa-085406	Oryza sativa	85.71	1.00e-131	461.00
IUUC-Sce-106318	Saccharomyces cerevisiae	34.09	2.10e-02	34.30
IUUC-Sit-110192	Setaria italica	93.75	6.00e-143	498.00
IUUC-Tae-123840	Triticum aestivum	84.05	7.00e-128	448.00
IUUC-Tur-126705	Triticum urartu	71.88	6.00e-89	319.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence