iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-050940

Ensembl Protein ID

LPERR11G10280.1

UniProt Accession

A0A0D9XRV8; A0A0D9XRV8_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR11G10280	LPERR11G10280.1	LPERR11G10280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	1.40e-32	112.4	127	174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           k+LLdltc+tVadmikgktpeeiRktFni+nDftpeEe+++R+EnqWA
   Q: 127  KGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWA 174
           89*********************************************9 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MAAAEGEKKM ITLKSSDGEE FEVEEAVAME SQTIRHMIED DCADNGIPLP NVNSKILSKV 60
IEYCNKHVHA AAAAASKAGT TSDDAASAAA VPSPSGEDLK NWDADFVKVD QATLFDLILA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCAAACCAAC TCGCCCCAAT CCGTCCCCAT CGAAATCTAT CGGCAGCCGC CGCGAAAAAG 60
CTAGGGTTTC GACGCCGGGA GAGGGAGAGG GAGGGAGCCG ATCGAGGAGG AGGAGGAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006881	Arabidopsis thaliana	76.19	2.00e-57	213.00
IUUC-Bdi-014448	Brachypodium distachyon	86.29	2.00e-63	233.00
IUUC-Oba-075637	Oryza barthii	94.83	9.00e-65	238.00
IUUC-Ogl-077492	Oryza glaberrima	94.83	9.00e-65	238.00
IUUC-Ogu-078927	Oryza glumaepatula	94.83	9.00e-65	238.00
IUUC-Oin-079204	Oryza indica	94.83	9.00e-65	238.00
IUUC-Olo-080526	Oryza longistaminata	87.77	8.00e-62	228.00
IUUC-Ome-081685	Oryza meridionalis	94.83	9.00e-65	238.00
IUUC-Oni-082053	Oryza nivara	94.83	9.00e-65	238.00
IUUC-Opu-083354	Oryza punctata	94.25	2.00e-68	250.00
IUUC-Oru-084246	Oryza rufipogon	94.83	9.00e-65	238.00
IUUC-Osa-086133	Oryza sativa	94.83	9.00e-65	238.00
IUUC-Ppa-095274	Physcomitrella patens	68.64	8.00e-50	188.00
IUUC-Smo-109307	Selaginella moellendorffii	69.88	9.00e-50	188.00
IUUC-Sit-110769	Setaria italica	90.29	5.00e-65	239.00
IUUC-Sbi-114358	Sorghum bicolor	90.86	3.00e-62	229.00
IUUC-Tae-123642	Triticum aestivum	80.68	1.00e-64	238.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence