iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017149

Ensembl Protein ID

Bra032309.1-P

UniProt Accession

M4EU27; M4EU27_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra032309	Bra032309.1	Bra032309.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-31	109.3	282	354

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +vp++f+CpIsl+lM+dPv++++G+tydr+sI++w+++g+ tcP+t+q+l ++ +vPn +l++li +wc +++
   Q: 282  SVPKDFVCPISLDLMTDPVIVSTGQTYDRTSIARWIEEGHCTCPKTGQTLMDSRIVPNRALKNLIVQWCTASG 354
           58*******************************************************************9876 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MATAAIFSSL RRRRSPSLEA FLAPFDLSGI ALVKTLASIS SEVVSSFAAT RFSFQRRNAR 60
ALLRKIEIFV VLFEFLAETR SPSSSTTALL CLKEFYLLIY RSKILLEYVA QSSKLWLLLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCACCG CGGCTATATT CTCATCTCTG CGGCGGAGGA GATCCCCATC ACTAGAAGCC 60
TTTTTAGCCC CCTTTGACCT CTCCGGCATC GCTCTCGTGA AAACCCTAGC TTCCATCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001129	Aegilops tauschii	47.20	1.00e-133	470.00
IUUC-Bdi-014675	Brachypodium distachyon	46.36	2.00e-147	515.00
IUUC-Bol-015274	Brassica oleracea	93.24	0.00e+00	1236.00
IUUC-Hvu-047822	Hordeum vulgare	45.40	3.00e-148	518.00
IUUC-Lpe-051105	Leersia perrieri	47.08	2.00e-146	512.00
IUUC-Mac-064857	Musa acuminata	47.23	2.00e-154	538.00
IUUC-Oba-075480	Oryza barthii	48.41	3.00e-135	474.00
IUUC-Ogl-077156	Oryza glaberrima	46.06	3.00e-147	515.00
IUUC-Ogu-078640	Oryza glumaepatula	46.06	9.00e-148	516.00
IUUC-Oin-079253	Oryza indica	43.85	1.00e-135	476.00
IUUC-Olo-080903	Oryza longistaminata	48.41	4.00e-135	474.00
IUUC-Ome-081982	Oryza meridionalis	46.06	3.00e-147	515.00
IUUC-Oni-082824	Oryza nivara	46.06	9.00e-148	516.00
IUUC-Opu-083758	Oryza punctata	46.13	2.00e-147	516.00
IUUC-Oru-084718	Oryza rufipogon	46.06	9.00e-148	516.00
IUUC-Sit-110022	Setaria italica	47.82	2.00e-151	529.00
IUUC-Sbi-114100	Sorghum bicolor	47.66	8.00e-154	536.00
IUUC-Tae-124437	Triticum aestivum	45.47	2.00e-149	523.00
IUUC-Tur-126627	Triticum urartu	49.41	5.00e-130	457.00
IUUC-Vvi-131159	Vitis vinifera	64.51	0.00e+00	762.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence