iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058056

Ensembl Protein ID

KEH23692

UniProt Accession

A0A072U1W2; A0A072U1W2_MEDTR

Genbank Protein ID

KEH23692.1

Protein Name

SCF ubiquitin ligase, SKP1 component

Genbank Nucleotide ID

CM001223

Gene Name

MTR_7g094120

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_7g094120	KEH23692	KEH23692

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	1.50e-27	96.9	110	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           ksLLdltc+  adm+kgktpee+R++Fni+nDf+peEea++R En+WA
   Q: 110  KSLLDLTCQSAADMMKGKTPEEMREMFNIKNDFSPEEEAAIRAENKWA 157
           89*********************************************9 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSSTTTKMIT LKSYDNEIFE VPEAVALESQ TIKHMIEDDC ADNAIPVQNV TGKILAKVIE 60
YCKKHVQVAS ADEKPSESEE YLKNWDADFV KVDKETLFEL ILAANYLDIK SLLDLTCQSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCAA CAACCACGAA GATGATCACC CTGAAGAGTT ACGACAACGA AATCTTTGAG 60
GTCCCCGAGG CGGTGGCGCT CGAATCACAG ACAATCAAGC ACATGATCGA GGACGATTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0016874--F:ligase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

mtr:MTR_7g094120

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007515	Arabidopsis thaliana	68.12	2.00e-60	224.00
IUUC-Olo-080619	Oryza longistaminata	57.50	2.00e-47	180.00
IUUC-Ptt-103874	Puccinia triticina	53.12	2.00e-34	139.00
IUUC-Sre-115178	Sporisorium reilianum	52.90	8.00e-41	158.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence