iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043270

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000834

Gene Name

LOC100779827; GLYMA_01G195200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA01G40310	GLYMA01G40310.1	GLYMA01G40310.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.30e-28	98.5	64	135

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           evp+ f+CpIsle+M+dP +l++G+ty+rs+I kw++ g+ tcP+t+q+l +++++Pn+tl rli+ w +++
   Q: 64   EVPSVFICPISLEPMQDPITLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSVTPNTTLYRLIHTWFSQK 135
           69******************************************************************9986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MPMFQPCRKD MVTGYEGGAD GQILDLDTAV KDGVLGGVEG GVVGGGVGEK VDLGKMIEEL 60
ELCEVPSVFI CPISLEPMQD PITLCTGQTY ERSNILKWFN LGHFTCPTTM QELWDDSVTP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTAACGGCG ACACATTAGA GGAGTGCACG TGTGGTGCTC GGGCCGAGAC CGGCTAATGG 60
CGGTAATGTA AAAATTACTA AAAGAAAACA AAAATTAATT AATGTAAAAC ATGGAATTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100779827

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000254	Aegilops tauschii	56.05	2.00e-143	502.00
IUUC-Aly-005542	Arabidopsis lyrata	73.94	1.00e-172	599.00
IUUC-Ath-007399	Arabidopsis thaliana	73.94	2.00e-173	602.00
IUUC-Bdi-014966	Brachypodium distachyon	56.48	4.00e-148	517.00
IUUC-Bol-015410	Brassica oleracea	72.38	6.00e-168	583.00
IUUC-Bra-017594	Brassica rapa	74.11	1.00e-162	565.00
IUUC-Hvu-047172	Hordeum vulgare	56.57	3.00e-141	495.00
IUUC-Lpe-050937	Leersia perrieri	57.72	6.00e-133	467.00
IUUC-Mtr-058060	Medicago truncatula	87.14	0.00e+00	773.00
IUUC-Oba-075363	Oryza barthii	53.08	1.00e-106	379.00
IUUC-Obr-076221	Oryza brachyantha	57.11	3.00e-139	488.00
IUUC-Ogl-077601	Oryza glaberrima	57.75	5.00e-127	447.00
IUUC-Ogu-078802	Oryza glumaepatula	57.11	4.00e-133	468.00
IUUC-Oin-079670	Oryza indica	57.54	1.00e-126	446.00
IUUC-Olo-080252	Oryza longistaminata	62.27	2.00e-83	302.00
IUUC-Ome-081565	Oryza meridionalis	57.54	1.00e-126	446.00
IUUC-Oni-082638	Oryza nivara	57.54	1.00e-126	446.00
IUUC-Opu-083387	Oryza punctata	57.54	2.00e-127	448.00
IUUC-Oru-084585	Oryza rufipogon	57.54	1.00e-126	446.00
IUUC-Osa-086056	Oryza sativa	57.54	1.00e-126	446.00
IUUC-Pop-098956	Populus trichocarpa	70.60	9.00e-166	576.00
IUUC-Ppe-101617	Prunus persica	81.74	0.00e+00	681.00
IUUC-Smo-108705	Selaginella moellendorffii	33.25	6.00e-47	181.00
IUUC-Sit-109761	Setaria italica	57.11	3.00e-138	484.00
IUUC-Sbi-113971	Sorghum bicolor	56.84	3.00e-144	504.00
IUUC-Tae-125028	Triticum aestivum	56.26	6.00e-144	503.00
IUUC-Vvi-131367	Vitis vinifera	80.62	0.00e+00	698.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence