iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114692

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G256300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g029150	Sb02g029150.1	Sb02g029150.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.10e-09	36.9	142	180

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++ +++ p ++ CgHvf+ +C+++        + + +CP+Cr
   Q: 142  CPICWNKMEE-PSTTTCGHVFCDTCIKQA------IKIQKKCPTCR 180
           ********99.999************877......9*********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSTVSGTRRA PRRQSQDGSA DKVLVIIEAS SRVAGSRRGP PTPVPGARNS PIDVEAIDDE 60
VQAVSPSRVP PPRRNRRTRR EPITVVDLEV ESSREGNKRQ RVVPVGHHLS SDSGAGSSLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTCCCTTCT TCTTCTTACC CCTCAAGTTC GGTCGCGCTT TCCGTTTCCC CCCTCCCCCT 60
CTTCGAACGA ACTCCTCGTT CGAACGAACT CGGGTCCGAT TCGGCAGGTG CGTGCGGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination

KEGG

sbi:SORBI_02g029150

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000858	Aegilops tauschii	64.71	4.00e-32	130.00
IUUC-Bdi-014145	Brachypodium distachyon	64.97	9.00e-50	188.00
IUUC-Cne-026870	Cryptococcus neoformans	44.90	6.00e-06	45.40
IUUC-Hvu-047067	Hordeum vulgare	57.75	9.00e-54	202.00
IUUC-Lpe-051638	Leersia perrieri	63.45	1.00e-54	205.00
IUUC-Oba-075848	Oryza barthii	67.71	6.00e-57	213.00
IUUC-Obr-076675	Oryza brachyantha	67.84	3.00e-47	179.00
IUUC-Ogl-077710	Oryza glaberrima	69.35	3.00e-63	233.00
IUUC-Ogu-078936	Oryza glumaepatula	69.35	2.00e-63	234.00
IUUC-Oin-079762	Oryza indica	40.78	5.00e-30	124.00
IUUC-Olo-081000	Oryza longistaminata	41.26	2.00e-31	128.00
IUUC-Ome-081927	Oryza meridionalis	38.92	2.00e-28	118.00
IUUC-Oni-082294	Oryza nivara	67.01	3.00e-57	214.00
IUUC-Opu-083928	Oryza punctata	68.42	1.00e-47	181.00
IUUC-Oru-085143	Oryza rufipogon	68.53	3.00e-59	221.00
IUUC-Osa-086064	Oryza sativa	69.35	3.00e-63	233.00
IUUC-Spo-108335	Schizosaccharomyces pombe	36.99	2.00e-09	55.80
IUUC-Sit-109928	Setaria italica	69.08	3.00e-59	220.00
IUUC-Tae-123147	Triticum aestivum	61.03	4.00e-53	200.00
IUUC-Tur-126363	Triticum urartu	62.62	8.00e-32	129.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence