iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006551

UUCD1 version

UUC-ArL-00837

Ensembl Protein ID

fgenesh2_kg.7__700__AT4G34040.1

UniProt Accession

D7MFS4; D7MFS4_ARALL

Genbank Protein ID

EFH43396.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348719

Gene Name

ARALYDRAFT_491267

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__700__AT4G34040.1	fgenesh2_kg.7__700__AT4G34040.1	fgenesh2_kg.7__700__AT4G34040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-06	29.4	620	661

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+e++   +d + +l+CgH fh+ C+++w       + + +CP+C+
   Q: 620  CCVCQEEYaegDD-LGTLGCGHEFHTACVKQW------LMLKNLCPICK 661
           ********66544.9999**************......**********6 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MQGPQSTGDS STGINYADGE PIRTTNSETT SNSILNPVDV QFPHNTTGPG RPTYPSSSSH 60
VVQNHNWWSF GESSSRLGPS DQVNSIGSKT DRQLPSDGYG FEEDQSGILL PGESFLRGSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAATCTCTAG GCCTCTTAAT CCTTGTCTTC CCTCATCCAC TGCTTCTCTT TTTTTTTTTT 60
TTAATAACCC ATTTCATCTC TTTCCCCTTT TATGCTCTTT TCATTCTTCA TCTTCTGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010228--P:vegetative to reproductive phase transition of meristem

KEGG

aly:ARALYDRAFT_491267

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000325	Aegilops tauschii	49.74	1.00e-46	180.00
IUUC-Ath-007241	Arabidopsis thaliana	95.50	0.00e+00	1167.00
IUUC-Cel-018318	Caenorhabditis elegans	50.98	5.00e-13	68.60
IUUC-Gac-041830	Gasterosteus aculeatus	29.63	6.00e-14	72.80
IUUC-Hvu-047680	Hordeum vulgare	55.75	2.00e-53	202.00
IUUC-Lpe-051474	Leersia perrieri	53.26	4.00e-50	192.00
IUUC-Mtr-057919	Medicago truncatula	41.80	2.00e-83	302.00
IUUC-Oba-075898	Oryza barthii	53.89	1.00e-49	191.00
IUUC-Obr-076185	Oryza brachyantha	53.26	8.00e-49	187.00
IUUC-Ogl-077587	Oryza glaberrima	53.89	1.00e-49	190.00
IUUC-Ogu-078729	Oryza glumaepatula	53.89	1.00e-49	191.00
IUUC-Oin-079127	Oryza indica	53.89	8.00e-50	191.00
IUUC-Olo-080490	Oryza longistaminata	53.89	9.00e-50	191.00
IUUC-Ome-081637	Oryza meridionalis	38.11	4.00e-52	198.00
IUUC-Oni-082106	Oryza nivara	53.89	1.00e-49	191.00
IUUC-Opu-084108	Oryza punctata	54.75	4.00e-50	192.00
IUUC-Oru-085229	Oryza rufipogon	53.89	1.00e-49	191.00
IUUC-Osa-085404	Oryza sativa	53.89	1.00e-49	191.00
IUUC-Ppe-101866	Prunus persica	41.78	7.00e-95	340.00
IUUC-Sit-110290	Setaria italica	54.34	6.00e-52	198.00
IUUC-Sbi-113819	Sorghum bicolor	53.98	4.00e-51	195.00
IUUC-Tca-121420	Theobroma cacao	53.83	2.00e-119	422.00
IUUC-Tae-124563	Triticum aestivum	54.02	8.00e-50	191.00
IUUC-Tur-126323	Triticum urartu	54.02	7.00e-50	191.00
IUUC-Vvi-131609	Vitis vinifera	43.28	2.00e-108	386.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence