iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113895

UUCD1 version

UUC-SoB-01338

Ensembl Protein ID

Sb09g005450.1

UniProt Accession

C5Z171; C5Z171_SORBI

Genbank Protein ID

EES17808.1; KXG21455.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768; CM000768

Gene Name

SORBI_009G065200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g005450	Sb09g005450.1	Sb09g005450.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.00e-10	39.9	336	377

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl ++   +d +++lpCgH+fh+dC+ kw       + +++CPlC+
   Q: 336  CCICLARYvdnDD-LRLLPCGHFFHKDCVDKW------LKINALCPLCK 377
           ********99666.******************......**********7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDALPVESER ESQTDSHPLL MEHVIGIPRD DVASTSTPRR DNNDGMDHLP RDSESSSGTT 60
AAYNSPNTPI ARRDDNRRRR QQSLNSGFWI SIELAVNLSQ IIAAICVLSV SRNEHPHAPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCACCGCCGC TGGAGACTGT GAAGCGAAAG AGGAGGAAGA ATTCGAGTCC AAGTCTTGGA 60
GCTGCCCCCC GCTTGGGTAA AAAATTTCCC CTTCCGCTAG TGCGATGCTT CCGTGTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_09g005450

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006190	Arabidopsis lyrata	50.78	4.00e-95	340.00
IUUC-Bdi-014783	Brachypodium distachyon	70.95	1.00e-148	518.00
IUUC-Hvu-047399	Hordeum vulgare	75.48	6.00e-147	513.00
IUUC-Lch-049512	Latimeria chalumnae	34.58	2.00e-13	70.90
IUUC-Lpe-051028	Leersia perrieri	71.23	9.00e-128	449.00
IUUC-Oba-075086	Oryza barthii	72.51	7.00e-135	472.00
IUUC-Obr-076582	Oryza brachyantha	71.76	5.00e-127	446.00
IUUC-Ogl-077290	Oryza glaberrima	72.51	7.00e-135	472.00
IUUC-Ogu-078966	Oryza glumaepatula	72.75	4.00e-135	473.00
IUUC-Oin-079535	Oryza indica	72.75	2.00e-135	474.00
IUUC-Olo-080967	Oryza longistaminata	73.22	1.00e-136	479.00
IUUC-Ome-081533	Oryza meridionalis	72.99	8.00e-136	476.00
IUUC-Oni-082670	Oryza nivara	72.99	3.00e-136	477.00
IUUC-Opu-083311	Oryza punctata	73.33	3.00e-131	460.00
IUUC-Oru-084956	Oryza rufipogon	72.99	2.00e-135	474.00
IUUC-Osa-085907	Oryza sativa	72.75	2.00e-135	474.00
IUUC-Sja-107946	Schizosaccharomyces japonicus	45.76	8.00e-13	66.60
IUUC-Sit-109977	Setaria italica	86.65	1.00e-177	614.00
IUUC-Sre-115097	Sporisorium reilianum	50.91	1.00e-12	67.80
IUUC-Tae-123033	Triticum aestivum	75.24	9.00e-141	492.00
IUUC-Tur-126522	Triticum urartu	74.76	8.00e-136	476.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence