iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-023361

Ensembl Protein ID

ENSCSAP00000012889.1

UniProt Accession

A0A0D9RWA0; A0A0D9RWA0_CHLSB

Genbank Protein ID

ENSCSAP00000012889

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01160144

Gene Name

LONRF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000016850.1	ENSCSAT00000014933.1	ENSCSAP00000012889.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-09	38.6	479	517
E3 activity/RING/U-box	1.60e-09	37.6	475	522

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  f++ p+++pCgH f+++Cl++          + +CPlC+
   Q: 479  CSLCMRLFFE-PVTTPCGHSFCKNCLERC------LDHAPYCPLCK 517
           **********.9**************999......9*********6 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplte 52
           ++f C++ + l+ +Pv++p+G+++ ++++e++l++    cP+++++l+e
   Q: 475  SDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPY-CPLCKESLKE 522
           68***********************************9.*******986 PP

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MSSPAVARSS PGGSREMAPA PQGRGRFWEV GGGSGLRLER AAAESERWEL LLRRGELLAL 60
GGHLKGALEA FAAALRRGAP ARPECLGALV DCLVFNYRLR HGLSWSAAPA AGADGGACGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCTCTC CGGCAGTGGC GAGGAGTTCC CCGGGAGGGA GTCGGGAGAT GGCCCCGGCG 60
CCGCAGGGCC GAGGCCGGTT CTGGGAAGTG GGCGGCGGCA GCGGCCTTCG GCTGGAGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg
PF13445--zf-RING_UBOX

SMART

SM00464--LON
SM00184--RING
SM00028--TPR

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

csab:103215365

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001989	Ailuropoda melanoleuca	91.95	0.00e+00	1000.00
IUUC-Atr-002972	Amborella trichopoda	42.71	7.00e-43	168.00
IUUC-Apl-003309	Anas platyrhynchos	79.95	0.00e+00	652.00
IUUC-Aca-004288	Anolis carolinensis	64.25	0.00e+00	877.00
IUUC-Aly-005476	Arabidopsis lyrata	35.96	1.00e-40	160.00
IUUC-Ath-006654	Arabidopsis thaliana	36.33	4.00e-41	162.00
IUUC-Ang-009643	Aspergillus niger	29.53	7.00e-39	155.00
IUUC-Ame-010716	Astyanax mexicanus	51.79	0.00e+00	649.00
IUUC-Bta-012903	Bos taurus	87.65	0.00e+00	1071.00
IUUC-Bdi-014333	Brachypodium distachyon	41.71	3.00e-42	166.00
IUUC-Bol-016150	Brassica oleracea	35.63	4.00e-41	162.00
IUUC-Bra-016716	Brassica rapa	34.18	2.00e-38	153.00
IUUC-Cja-019312	Callithrix jacchus	98.14	0.00e+00	1248.00
IUUC-Cfa-020159	Canis familiaris	92.04	0.00e+00	1137.00
IUUC-Cpo-022528	Cavia porcellus	92.12	0.00e+00	982.00
IUUC-Cho-024549	Choloepus hoffmanni	83.83	0.00e+00	843.00
IUUC-Cgl-026514	Colletotrichum gloeosporioides	27.84	1.00e-45	177.00
IUUC-Cme-027153	Cyanidioschyzon merolae	30.35	2.00e-29	123.00
IUUC-Dre-028195	Danio rerio	49.86	0.00e+00	654.00
IUUC-Dno-029284	Dasypus novemcinctus	90.82	0.00e+00	1008.00
IUUC-Dor-031123	Dipodomys ordii	80.97	0.00e+00	727.00
IUUC-Dme-031919	Drosophila melanogaster	37.24	1.00e-65	244.00
IUUC-Ete-032455	Echinops telfairi	91.07	0.00e+00	768.00
IUUC-Eca-033248	Equus caballus	95.49	0.00e+00	777.00
IUUC-Eeu-034441	Erinaceus europaeus	92.55	0.00e+00	806.00
IUUC-Fca-035551	Felis catus	92.13	0.00e+00	1025.00
IUUC-Fal-036731	Ficedula albicollis	76.14	0.00e+00	828.00
IUUC-Gmo-039315	Gadus morhua	45.47	2.00e-165	575.00
IUUC-Gga-040888	Gallus gallus	80.05	0.00e+00	689.00
IUUC-Gac-042121	Gasterosteus aculeatus	50.34	0.00e+00	648.00
IUUC-Ggo-044985	Gorilla gorilla	97.20	0.00e+00	1100.00
IUUC-Hsa-046592	Homo sapiens	98.32	0.00e+00	1255.00
IUUC-Hvu-047145	Hordeum vulgare	40.65	1.00e-24	107.00
IUUC-Itr-048573	Ictidomys tridecemlineatus	93.85	0.00e+00	1082.00
IUUC-Lch-050404	Latimeria chalumnae	57.14	0.00e+00	756.00
IUUC-Laf-053431	Loxodonta africana	90.82	0.00e+00	999.00
IUUC-Mcc-055751	Macaca mulatta	97.85	0.00e+00	1083.00
IUUC-Mor-056963	Magnaporthe oryzae	41.71	3.00e-41	163.00
IUUC-Mla-058946	Melampsora laricipopulina	34.78	4.00e-46	179.00
IUUC-Mmr-061283	Microcebus murinus	94.83	0.00e+00	1207.00
IUUC-Mmu-063169	Mus musculus	87.32	0.00e+00	1066.00
IUUC-Mac-065566	Musa acuminata	38.10	4.00e-44	172.00
IUUC-Mpu-066537	Mustela putorius furo	91.98	0.00e+00	1187.00
IUUC-Mlu-067497	Myotis lucifugus	91.95	0.00e+00	1020.00
IUUC-Nle-068971	Nomascus leucogenys	98.87	0.00e+00	1031.00
IUUC-Opr-070791	Ochotona princeps	93.71	0.00e+00	922.00
IUUC-Ont-071548	Oreochromis niloticus	50.96	0.00e+00	666.00
IUUC-Oan-072747	Ornithorhynchus anatinus	85.32	0.00e+00	719.00
IUUC-Ocu-074928	Oryctolagus cuniculus	95.74	0.00e+00	797.00
IUUC-Oba-075239	Oryza barthii	41.15	2.00e-42	167.00
IUUC-Obr-076158	Oryza brachyantha	40.62	3.00e-44	172.00
IUUC-Ogu-078154	Oryza glumaepatula	42.11	5.00e-43	169.00
IUUC-Oin-079067	Oryza indica	38.77	7.00e-43	168.00
IUUC-Olo-080663	Oryza longistaminata	41.15	2.00e-42	166.00
IUUC-Oni-082119	Oryza nivara	35.82	6.00e-43	168.00
IUUC-Opu-083266	Oryza punctata	42.11	3.00e-31	129.00
IUUC-Oru-085190	Oryza rufipogon	41.15	2.00e-42	166.00
IUUC-Ola-086977	Oryzias latipes	52.47	0.00e+00	680.00
IUUC-Oga-088719	Otolemur garnettii	88.89	0.00e+00	1194.00
IUUC-Oar-089577	Ovis aries	91.98	0.00e+00	1028.00
IUUC-Ptr-090711	Pan troglodytes	98.45	0.00e+00	1258.00
IUUC-Pan-092587	Papio anubis	99.48	0.00e+00	1243.00
IUUC-Psi-093128	Pelodiscus sinensis	74.22	0.00e+00	873.00
IUUC-Pfo-096474	Poecilia formosa	50.83	0.00e+00	664.00
IUUC-Pab-097800	Pongo abelii	96.96	0.00e+00	1197.00
IUUC-Pop-100044	Populus trichocarpa	34.03	4.00e-43	169.00
IUUC-Pte-104214	Pyrenophora teres	30.15	5.00e-39	155.00
IUUC-Pyt-104565	Pyrenophora triticirepentis	30.15	5.00e-39	155.00
IUUC-Rno-105718	Rattus norvegicus	85.71	0.00e+00	1024.00
IUUC-Sit-110495	Setaria italica	38.33	8.00e-42	165.00
IUUC-Sly-111396	Solanum lycopersicum	33.90	7.00e-42	164.00
IUUC-Sar-113220	Sorex araneus	89.65	0.00e+00	734.00
IUUC-Sbi-114779	Sorghum bicolor	37.50	7.00e-29	121.00
IUUC-Ssc-115733	Sus scrofa	89.91	0.00e+00	1170.00
IUUC-Tgu-117431	Taeniopygia guttata	70.29	0.00e+00	877.00
IUUC-Tru-118274	Takifugu rubripes	51.04	0.00e+00	637.00
IUUC-Tsy-119043	Tarsius syrichta	95.50	0.00e+00	1021.00
IUUC-Tni-120766	Tetraodon nigroviridis	50.22	4.00e-173	601.00
IUUC-Tca-121632	Theobroma cacao	31.94	2.00e-44	173.00
IUUC-Tae-125900	Triticum aestivum	34.38	1.00e-44	174.00
IUUC-Tur-126297	Triticum urartu	40.74	4.00e-32	132.00
IUUC-Tme-127112	Tuber melanosporum	37.04	1.00e-46	181.00
IUUC-Tbe-127284	Tupaia belangeri	91.59	0.00e+00	787.00
IUUC-Vda-129721	Verticillium dahliae	27.56	6.00e-36	145.00
IUUC-Vpa-130408	Vicugna pacos	84.96	0.00e+00	891.00
IUUC-Xtr-132417	Xenopus tropicalis	57.70	0.00e+00	738.00
IUUC-Xma-134099	Xiphophorus maculatus	50.34	0.00e+00	657.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence