iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099998

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000354

Gene Name

POPTRDRAFT_586323; POPTR_0018s03740g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0018s03740	POPTR_0018s03740.1	POPTR_0018s03740.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.60e-06	27.3	492	533

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++   d++  l+C H +h +C+++w       s +  CP+C+
   Q: 492  CSICQEEYvvGDEVGRLQCEHGYHMSCIHQW------LSLKNWCPICK 533
           ********9955588899*************......666666****6 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDDYSGKRAG DRFIVSRKGS PHVLRDTANN RDQKAQFCNR IGCSGRLNSS KGTQISSEKA 60
KSSRPRPLIS SSSSGKEKNG SSSNKAFSAI SKPRNSLQEP RKKFSSQLES ESLETGSGQD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCACTTCTC TCTCTACTAA CTTTCTCTCT CTGAAAAACG CCTCCTTTTC TCTCTTTAAG 60
CCTCTCCCTC TTTATCGAAC AAACACAGAA GGAAAAGAAG AAGAAAAGGT AGACCAGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0018s03740g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000715	Aegilops tauschii	51.88	1.00e-34	139.00
IUUC-Aly-005483	Arabidopsis lyrata	40.29	3.00e-76	278.00
IUUC-Ath-006757	Arabidopsis thaliana	64.57	1.00e-69	256.00
IUUC-Bra-017940	Brassica rapa	50.47	1.00e-68	253.00
IUUC-Gma-042907	Glycine max	54.53	4.00e-133	468.00
IUUC-Hvu-047200	Hordeum vulgare	62.26	3.00e-58	219.00
IUUC-Lpe-051551	Leersia perrieri	53.38	9.00e-70	257.00
IUUC-Mac-064708	Musa acuminata	48.55	5.00e-65	241.00
IUUC-Oba-074994	Oryza barthii	55.81	8.00e-71	260.00
IUUC-Obr-076337	Oryza brachyantha	69.08	3.00e-53	202.00
IUUC-Ogl-077817	Oryza glaberrima	55.81	8.00e-71	260.00
IUUC-Ogu-077954	Oryza glumaepatula	56.20	1.00e-71	263.00
IUUC-Oin-079102	Oryza indica	57.50	2.00e-35	142.00
IUUC-Olo-080304	Oryza longistaminata	56.20	1.00e-71	263.00
IUUC-Oni-082765	Oryza nivara	56.20	2.00e-71	262.00
IUUC-Opu-083134	Oryza punctata	49.15	1.00e-70	259.00
IUUC-Oru-084289	Oryza rufipogon	56.20	2.00e-71	262.00
IUUC-Osa-085712	Oryza sativa	56.20	2.00e-71	262.00
IUUC-Ppa-095313	Physcomitrella patens	59.06	1.00e-52	201.00
IUUC-Smo-109387	Selaginella moellendorffii	52.94	3.00e-44	172.00
IUUC-Sit-110673	Setaria italica	57.85	2.00e-37	149.00
IUUC-Stu-112025	Solanum tuberosum	42.28	1.00e-85	309.00
IUUC-Sbi-114458	Sorghum bicolor	56.41	4.00e-36	144.00
IUUC-Tca-121441	Theobroma cacao	59.29	5.00e-135	473.00
IUUC-Tur-126633	Triticum urartu	51.91	6.00e-35	140.00
IUUC-Vvi-131488	Vitis vinifera	58.45	1.00e-141	496.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence