iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016956

Ensembl Protein ID

Bra010647.1-P

UniProt Accession

M4D2E7; M4D2E7_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra010647	Bra010647.1	Bra010647.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	9.40e-100	335.1	23	366

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgyeqqDaqE 94
           +G++N+gNtCY+NSvLQ+L+++ ++re+lle +  + +     +++++l+++l++lf+++   k+k+++++p+++++ lkk +e f++y++qDa+E
   Q: 23   FGFENFGNTCYCNSVLQALYFCVPFREQLLE-YYTSNKSV--ADSEENLMTCLADLFSQISsqKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHE 115
           69*****************************.44443333..6899**************98899999**************************** PP
   S: 95   flaflldqleeelkkeknkpkeeeeeedkselsde.........aeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkee 181
           fl++ll+++ + l+ke++ +++ e+e+++s+++++         a+  +k+   ++++++Fqg l+++++cl+c++v+ r+e+fldlsl++++++ 
   Q: 116  FLNYLLNEVVDILEKEAKATTKPERETSSSSSPEKiangpkaplANGVHKEPVVTWVHNIFQGILTNETRCLRCETVTARDETFLDLSLDIEQNS- 210
           *************99888888888888888888889999999998899999999*****************************************. PP
   S: 182  tkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkk 277
               s+++cL++f+++e+l+ e+k++c+kc+++qea+k++k+kk P++L++hLkRf++ e+ ++ +k++ +v fpleL+ls+ ++  +     +++
   Q: 211  ----SITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVEPYT-----DVE 297
           ....9****************************************************************************8777733.....789 PP
   S: 278  YeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetg.........staYvlfYkr 337
           Y+L+avvvH G ++++GHYv++vk+ +++Wl fdD++V+ ++e+ v+++ g         + +Y+lfY++
   Q: 298  YSLFAVVVHVGsGPNHGHYVSLVKS-HNHWLFFDDENVEMIEESAVQTFFGssqeyssntDHGYILFYES 366
           *************************.889*******************999*****************85 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGAAGSKLEK ALGDQFPEGE RYFGFENFGN TCYCNSVLQA LYFCVPFREQ LLEYYTSNKS 60
VADSEENLMT CLADLFSQIS SQKKKTGVIA PKRFVQRLKK QNELFRSYMH QDAHEFLNYL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCGCCG CGGGGTCCAA ACTCGAGAAA GCTCTCGGCG ACCAGTTCCC CGAAGGCGAG 60
CGCTACTTCG GCTTCGAGAA TTTCGGCAAC ACTTGTTACT GCAACAGCGT TTTGCAGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000193	Aegilops tauschii	81.40	0.00e+00	634.00
IUUC-Atr-002650	Amborella trichopoda	88.01	0.00e+00	665.00
IUUC-Aca-005031	Anolis carolinensis	58.54	4.00e-125	441.00
IUUC-Aly-005830	Arabidopsis lyrata	96.50	0.00e+00	708.00
IUUC-Ath-007280	Arabidopsis thaliana	96.77	0.00e+00	711.00
IUUC-Ago-007871	Ashbya gossypii	35.14	1.00e-47	184.00
IUUC-Acl-008239	Aspergillus clavatus	44.59	2.00e-71	263.00
IUUC-Afl-008602	Aspergillus flavus	48.51	3.00e-74	272.00
IUUC-Afu-008816	Aspergillus fumigatus	45.34	5.00e-72	265.00
IUUC-Ani-009137	Aspergillus nidulans	47.70	6.00e-71	261.00
IUUC-Ang-009703	Aspergillus niger	47.88	3.00e-74	272.00
IUUC-Aor-009901	Aspergillus oryzae	48.51	2.00e-74	273.00
IUUC-Ate-010431	Aspergillus terreus	48.03	3.00e-71	263.00
IUUC-Ame-011015	Astyanax mexicanus	58.27	2.00e-125	441.00
IUUC-Bgr-012071	Blumeria graminis	44.03	2.00e-76	280.00
IUUC-Bci-013837	Botrytis cinerea	44.14	6.00e-76	278.00
IUUC-Bdi-014887	Brachypodium distachyon	84.24	0.00e+00	636.00
IUUC-Bol-015409	Brassica oleracea	99.46	0.00e+00	765.00
IUUC-Cel-018379	Caenorhabditis elegans	50.12	1.00e-110	392.00
IUUC-Cfa-020534	Canis familiaris	59.35	3.00e-124	437.00
IUUC-Cre-022711	Chlamydomonas reinhardtii	62.37	3.00e-123	434.00
IUUC-Cho-024902	Choloepus hoffmanni	49.73	1.00e-94	339.00
IUUC-Cin-025659	Ciona intestinalis	47.87	8.00e-101	360.00
IUUC-Csv-025828	Ciona savignyi	46.33	3.00e-100	358.00
IUUC-Cgl-026611	Colletotrichum gloeosporioides	43.56	7.00e-76	278.00
IUUC-Dre-027845	Danio rerio	59.08	3.00e-125	441.00
IUUC-Dor-030972	Dipodomys ordii	57.36	3.00e-84	304.00
IUUC-Dse-031470	Dothistroma septosporum	47.32	4.00e-73	269.00
IUUC-Dme-032038	Drosophila melanogaster	60.30	5.00e-71	261.00
IUUC-Fal-036833	Ficedula albicollis	58.97	4.00e-123	434.00
IUUC-Fox-037682	Fusarium oxysporum	42.81	1.00e-74	274.00
IUUC-Fso-038299	Fusarium solani	38.42	1.00e-77	284.00
IUUC-Gmo-038763	Gadus morhua	59.08	2.00e-126	444.00
IUUC-Ggr-039806	Gaeumannomyces graminis	44.04	1.00e-78	287.00
IUUC-Gac-041967	Gasterosteus aculeatus	58.81	1.00e-126	446.00
IUUC-Gma-043828	Glycine max	89.78	0.00e+00	686.00
IUUC-Hvu-047692	Hordeum vulgare	81.40	4.00e-180	623.00
IUUC-Kpa-049250	Komagataella pastoris	43.09	3.00e-67	249.00
IUUC-Lch-049969	Latimeria chalumnae	59.08	2.00e-122	432.00
IUUC-Lpe-051368	Leersia perrieri	82.61	0.00e+00	635.00
IUUC-Loc-051968	Lepisosteus oculatus	59.08	2.00e-124	438.00
IUUC-Lma-053300	Leptosphaeria maculans	43.07	3.00e-75	276.00
IUUC-Mor-057072	Magnaporthe oryzae	44.10	1.00e-77	283.00
IUUC-Mpo-057424	Magnaporthe poae	43.73	5.00e-77	281.00
IUUC-Mtr-057715	Medicago truncatula	88.38	0.00e+00	672.00
IUUC-Mla-059142	Melampsora laricipopulina	52.41	5.00e-93	335.00
IUUC-Mvi-060357	Microbotryum violaceum	52.07	1.00e-76	281.00
IUUC-Mmr-060751	Microcebus murinus	59.35	2.00e-124	438.00
IUUC-Mac-064964	Musa acuminata	83.42	0.00e+00	639.00
IUUC-Nfi-068611	Neosartorya fischeri	46.01	3.00e-72	266.00
IUUC-Ncr-068699	Neurospora crassa	44.14	3.00e-76	279.00
IUUC-Ont-072658	Oreochromis niloticus	58.81	1.00e-126	445.00
IUUC-Oan-073372	Ornithorhynchus anatinus	59.24	2.00e-123	435.00
IUUC-Oba-075620	Oryza barthii	83.70	0.00e+00	631.00
IUUC-Obr-076208	Oryza brachyantha	83.70	0.00e+00	631.00
IUUC-Ogl-077763	Oryza glaberrima	83.70	0.00e+00	631.00
IUUC-Ogu-078571	Oryza glumaepatula	83.42	0.00e+00	627.00
IUUC-Oin-080002	Oryza indica	83.70	0.00e+00	646.00
IUUC-Olo-080882	Oryza longistaminata	82.34	0.00e+00	632.00
IUUC-Ome-081549	Oryza meridionalis	82.34	0.00e+00	632.00
IUUC-Oni-082982	Oryza nivara	82.34	0.00e+00	632.00
IUUC-Opu-084002	Oryza punctata	83.42	0.00e+00	630.00
IUUC-Oru-084226	Oryza rufipogon	83.70	0.00e+00	646.00
IUUC-Osa-085453	Oryza sativa	83.70	0.00e+00	646.00
IUUC-Ola-087418	Oryzias latipes	58.81	9.00e-127	446.00
IUUC-Pma-094388	Petromyzon marinus	59.30	1.00e-124	439.00
IUUC-Pno-095044	Phaeosphaeria nodorum	46.53	4.00e-73	269.00
IUUC-Ppa-095275	Physcomitrella patens	82.43	0.00e+00	638.00
IUUC-Pfo-097052	Poecilia formosa	59.08	5.00e-127	447.00
IUUC-Pop-099798	Populus trichocarpa	88.11	0.00e+00	683.00
IUUC-Pca-100835	Procavia capensis	54.55	9.00e-100	356.00
IUUC-Ppe-101474	Prunus persica	88.98	0.00e+00	687.00
IUUC-Pgr-103306	Puccinia graminis	51.47	8.00e-93	335.00
IUUC-Pte-104356	Pyrenophora teres	43.67	1.00e-72	268.00
IUUC-Pyt-104709	Pyrenophora triticirepentis	47.56	1.00e-72	267.00
IUUC-Sce-106367	Saccharomyces cerevisiae	38.61	6.00e-60	225.00
IUUC-Spo-108095	Schizosaccharomyces pombe	45.02	7.00e-72	264.00
IUUC-Smo-109064	Selaginella moellendorffii	79.52	2.00e-167	581.00
IUUC-Sit-109700	Setaria italica	84.78	0.00e+00	635.00
IUUC-Sly-111210	Solanum lycopersicum	88.28	0.00e+00	669.00
IUUC-Stu-112398	Solanum tuberosum	85.68	0.00e+00	659.00
IUUC-Sar-113216	Sorex araneus	58.97	3.00e-121	427.00
IUUC-Sbi-114562	Sorghum bicolor	84.51	0.00e+00	649.00
IUUC-Tru-118613	Takifugu rubripes	58.81	8.00e-127	446.00
IUUC-Tsy-119520	Tarsius syrichta	50.57	5.00e-68	250.00
IUUC-Tni-120293	Tetraodon nigroviridis	58.81	8.00e-127	446.00
IUUC-Tca-121329	Theobroma cacao	89.95	0.00e+00	688.00
IUUC-Tre-122226	Trichoderma reesei	43.44	1.00e-76	280.00
IUUC-Tvi-122330	Trichoderma virens	43.44	1.00e-76	281.00
IUUC-Tae-125611	Triticum aestivum	83.97	0.00e+00	632.00
IUUC-Tur-126331	Triticum urartu	83.70	0.00e+00	630.00
IUUC-Tme-126890	Tuber melanosporum	45.48	1.00e-87	317.00
IUUC-Tbe-127783	Tupaia belangeri	58.86	1.00e-120	426.00
IUUC-Ttr-129083	Tursiops truncatus	59.08	7.00e-124	436.00
IUUC-Vda-129736	Verticillium dahliae	37.85	4.00e-59	222.00
IUUC-Vvi-131371	Vitis vinifera	89.01	0.00e+00	686.00
IUUC-Xtr-132082	Xenopus tropicalis	57.80	3.00e-122	431.00
IUUC-Xma-133475	Xiphophorus maculatus	59.08	5.00e-127	447.00
IUUC-Yli-134632	Yarrowia lipolytica	45.07	1.00e-74	273.00
IUUC-Zma-135752	Zea mays	84.78	0.00e+00	634.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence