iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__2028__AT3G18290.1	fgenesh2_kg.3__2028__AT3G18290.1	fgenesh2_kg.3__2028__AT3G18290.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.70e-06	29.1	1135	1176

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iC+e +   ++ ++ lpCgH +h  C+q++      ++ + +CP+C
   Q: 1135 CPICCEFLftsSEAVRALPCGHYMHSACFQAY------TCSHYTCPIC 1176
           ****9988677444******************......********** PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MATPLPDFET ARGGGGVASS STTVLTSSVS SSSSSRPLPV ANSFSEDAEE ISPILIFLFF 60
HKAVCSELET LHRLALEFAT GHHVDLRLLR ERYRFLRSIY KHHCNAEDEV IFSALDIRVK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCCAGATA AACATTAATA AAACGATAAA AAGGCAAAAA AAAAAAGAAA AGAAAGCAAA 60
AGCAAAATCA AAATCGATAT ATCAGACAAC GCCTCGACCT TTCTTTCTCA TCGTCTCCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR012312--Haemerythrin-like
IPR004039--Rubredoxin-type_fold
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF01814--Hemerythrin
PF05495--zf-CHY
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0005506--F:iron ion binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0010106--P:cellular response to iron ion starvation
GO:0060586--P:multicellular organismal iron ion homeostasis

KEGG

aly:ARALYDRAFT_479327

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000576	Aegilops tauschii	59.56	0.00e+00	979.00
IUUC-Atr-002767	Amborella trichopoda	62.44	0.00e+00	1465.00
IUUC-Ath-006780	Arabidopsis thaliana	97.61	0.00e+00	2349.00
IUUC-Ago-007995	Ashbya gossypii	45.15	3.00e-48	185.00
IUUC-Acl-008144	Aspergillus clavatus	41.85	3.00e-64	239.00
IUUC-Afl-008618	Aspergillus flavus	43.90	5.00e-63	235.00
IUUC-Afu-008863	Aspergillus fumigatus	45.64	1.00e-64	240.00
IUUC-Ani-009131	Aspergillus nidulans	42.23	3.00e-51	195.00
IUUC-Ang-009555	Aspergillus niger	43.88	6.00e-62	231.00
IUUC-Aor-010177	Aspergillus oryzae	43.16	7.00e-55	206.00
IUUC-Ate-010343	Aspergillus terreus	42.68	8.00e-58	218.00
IUUC-Bgr-012193	Blumeria graminis	42.23	3.00e-58	219.00
IUUC-Bci-013852	Botrytis cinerea	43.48	3.00e-60	225.00
IUUC-Bdi-014654	Brachypodium distachyon	60.92	0.00e+00	1477.00
IUUC-Bol-015920	Brassica oleracea	90.20	0.00e+00	2127.00
IUUC-Bra-016951	Brassica rapa	89.39	0.00e+00	2138.00
IUUC-Cre-022849	Chlamydomonas reinhardtii	42.21	2.00e-83	301.00
IUUC-Cgl-026589	Colletotrichum gloeosporioides	42.50	1.00e-57	217.00
IUUC-Cme-027329	Cyanidioschyzon merolae	33.44	3.00e-104	372.00
IUUC-Dse-031251	Dothistroma septosporum	38.18	2.00e-51	197.00
IUUC-Fso-038415	Fusarium solani	42.97	6.00e-59	221.00
IUUC-Gma-044114	Glycine max	68.16	0.00e+00	1621.00
IUUC-Hvu-047624	Hordeum vulgare	60.56	0.00e+00	1273.00
IUUC-Lpe-051008	Leersia perrieri	59.88	0.00e+00	1359.00
IUUC-Lma-053261	Leptosphaeria maculans	48.18	3.00e-27	115.00
IUUC-Mtr-058804	Medicago truncatula	66.91	0.00e+00	1616.00
IUUC-Mac-065612	Musa acuminata	61.76	0.00e+00	1420.00
IUUC-Nfi-068506	Neosartorya fischeri	45.64	1.00e-64	240.00
IUUC-Ncr-068859	Neurospora crassa	40.13	2.00e-66	246.00
IUUC-Oba-075234	Oryza barthii	60.40	0.00e+00	1425.00
IUUC-Obr-076227	Oryza brachyantha	61.54	0.00e+00	1493.00
IUUC-Ogl-077879	Oryza glaberrima	62.00	0.00e+00	1422.00
IUUC-Ogu-078665	Oryza glumaepatula	60.71	0.00e+00	1391.00
IUUC-Oin-079897	Oryza indica	62.03	0.00e+00	1422.00
IUUC-Olo-080658	Oryza longistaminata	57.21	0.00e+00	1060.00
IUUC-Ome-081810	Oryza meridionalis	61.26	0.00e+00	1448.00
IUUC-Oni-082612	Oryza nivara	62.03	0.00e+00	1422.00
IUUC-Opu-083373	Oryza punctata	59.56	0.00e+00	1473.00
IUUC-Oru-084378	Oryza rufipogon	60.79	0.00e+00	1392.00
IUUC-Osa-085292	Oryza sativa	62.03	0.00e+00	1422.00
IUUC-Olu-087838	Ostreococcus lucimarinus	46.42	8.00e-109	386.00
IUUC-Pno-094998	Phaeosphaeria nodorum	46.89	2.00e-65	243.00
IUUC-Ppa-095805	Physcomitrella patens	44.21	0.00e+00	654.00
IUUC-Pop-099616	Populus trichocarpa	67.56	0.00e+00	1611.00
IUUC-Ppe-101569	Prunus persica	69.77	0.00e+00	1679.00
IUUC-Pte-104080	Pyrenophora teres	42.34	7.00e-62	231.00
IUUC-Pyt-104774	Pyrenophora triticirepentis	41.94	3.00e-60	226.00
IUUC-Sja-107843	Schizosaccharomyces japonicus	35.89	5.00e-61	227.00
IUUC-Spo-108194	Schizosaccharomyces pombe	38.36	5.00e-61	227.00
IUUC-Smo-108962	Selaginella moellendorffii	49.42	0.00e+00	1143.00
IUUC-Sit-109905	Setaria italica	59.84	0.00e+00	1445.00
IUUC-Sly-110954	Solanum lycopersicum	64.73	0.00e+00	1571.00
IUUC-Sbi-114417	Sorghum bicolor	64.05	0.00e+00	1053.00
IUUC-Tca-121641	Theobroma cacao	71.18	0.00e+00	1667.00
IUUC-Tre-121938	Trichoderma reesei	43.88	1.00e-58	220.00
IUUC-Tvi-122465	Trichoderma virens	37.46	1.00e-60	226.00
IUUC-Tae-123407	Triticum aestivum	61.81	0.00e+00	1411.00
IUUC-Tur-126837	Triticum urartu	54.35	0.00e+00	847.00
IUUC-Vda-129684	Verticillium dahliae	43.82	1.00e-56	213.00
IUUC-Vvi-131636	Vitis vinifera	69.12	0.00e+00	1653.00
IUUC-Yli-134456	Yarrowia lipolytica	41.72	1.00e-69	256.00
IUUC-Zma-134730	Zea mays	59.76	0.00e+00	1432.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence