iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006937

Ensembl Protein ID

AT1G18910.1

UniProt Accession

F4IDY5; Q67YB6; Q9LMD9; BTSL1_ARATH

Genbank Protein ID

AAF79306.1; AEE29781.1; BAD44315.1

Protein Name

Zinc finger protein BRUTUS-like At1g18910

Genbank Nucleotide ID

AC068602; CP002684; AK176552

Gene Name

At1g18910; F14D16.3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G18910	AT1G18910.1	AT1G18910.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.90e-07	30.8	1148	1189

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iC+e +     +++ lpCgHv+h +C+q +      ++ + +CP+C
   Q: 1148 CPICHEYIftsNSPVKALPCGHVMHSTCFQEY------TCSHYTCPIC 1189
           ******99665445999***************......********** PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Probable E3 ubiquitin-protein ligase that may regulate the response to iron deficiency and thus contributes to iron homeostasis.

Protein Sequence
(Fasta)

MGVGDPLPLP PEKNRREVNK PPDIASTSSS SASAVNNARL SDAPILLFVY FHKAFRAQLA 60
ELQFLAGDTV RSGSDLAVEL RSKFEFLKLV YKYHSAAEDE VIFSALDTRV KNIVFNYSLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGACAAGTT AGAGAAGAGA AGAGCTTGAC GACGATGAAT ATGATCGACC CTTTAAATAA 60
CCTTCTCTTC TCGTCAACGC GTTTCCTTCT TCTTCTTTCC TCGTTTTTCT CTTGTCTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0408--Iron
KW-0436--Ligase
KW-0472--Membrane
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012312--Haemerythrin-like
IPR004039--Rubredoxin-type_fold
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF01814--Hemerythrin
PF05495--zf-CHY
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005634--C:nucleus
GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding
GO:0010106--P:cellular response to iron ion starvation

KEGG

ath:AT1G18910

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006279	Arabidopsis lyrata	92.02	0.00e+00	2283.00
IUUC-Bol-016373	Brassica oleracea	79.40	0.00e+00	1939.00
IUUC-Bra-016741	Brassica rapa	79.87	0.00e+00	1939.00
IUUC-Fox-037872	Fusarium oxysporum	49.28	1.00e-36	147.00
IUUC-Lma-053154	Leptosphaeria maculans	41.38	8.00e-21	93.60
IUUC-Pca-100669	Procavia capensis	49.56	8.00e-30	123.00
IUUC-Ssl-108426	Sclerotinia sclerotiorum	37.29	1.00e-42	167.00
IUUC-Ttr-128736	Tursiops truncatus	49.56	6.00e-29	120.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence