iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d049708	Zm00001d049708_T007	Zm00001d049708_T007
Zm00001d049708	Zm00001d049708_T002	Zm00001d049708_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.20e-28	99.6	229	301

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+Cp+slelM+dPv+++sG+ty+r +I+ wl++g + cP+t q+l +++l+Pn+t+++li +wce++++
   Q: 229  IPADFCCPLSLELMSDPVIVASGQTYERVYIKLWLDEGFTICPKTLQRLGHSNLIPNYTVKALIANWCESHDI 301
           8*********************************************************************986 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MDNLSPATLL NSISCLGALT SDVSTARPKP IHKYCKNVYD ISSIVTPLLE DLCKSPEEQL 60
DEVLRDLDTA VNEASGLIGN WHQTTSKMYF GWRIESVISD IQGCSLQLCQ LVNSLLPSLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGGTTGAT GGATAATCTC TCTCCAGCCA CTCTGCTCAA CAGTATCTCC TGTCTTGGCG 60
CCCTAACATC TGATGTCTCT ACTGCGAGAC CCAAGCCTAT TCACAAGTAT TGCAAAAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ate-010256	Aspergillus terreus	28.07	2.00e-20	93.60
IUUC-Bci-013587	Botrytis cinerea	30.83	2.00e-20	93.60
IUUC-Kpa-049403	Komagataella pastoris	29.49	6.00e-23	102.00
IUUC-Lma-053243	Leptosphaeria maculans	30.12	3.00e-22	100.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence