iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131458

Ensembl Protein ID

VIT_07s0141g00290.t01

UniProt Accession

F6GXL5; F6GXL5_VITVI

Genbank Protein ID

CCB44701.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

FN594965

Gene Name

VIT_07s0141g00290

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_07s0141g00290	VIT_07s0141g00290.t01	VIT_07s0141g00290.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	6.70e-16	58.8	122	219

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldka 66
           +vkvs++g+++++++dl+ ++++++L +a+   +                         l++ +  ++YeD+dGD++ l++D++++++
   Q: 122  FVKVSMDGAPYLRKVDLKMYTSYQELSNALGNmFSsftignygsqgmkdfmnesklmdLLNGFDHVPTYEDKDGDWM-LVGDVPWEMF 208
           8*******************************622566999****************9999999*************.********** PP
   S: 67   vsllaskksllrlliqk 83
           v+      s++rl+i+k
   Q: 209  VD------SCKRLRIMK 219
           **......********8 PP

Organism

Vitis vinifera

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MATMHGEERE KPDLNLEATE LRLGLPGGSE GSEVVRKRGF SETVDLKLNL SGKEAGVDDN 60
KVKSLQKEKS KSLLPCGNDP ARPPAKAQVV GWPPVRSFRK NMLAGQKGGS EEGEKVSCNA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTATCGTCG TCTTCTTCTT CTTCAAAACT ACTTTCTCTC ATTAACTTTC TTTCCAATTC 60
AATTTCTGAC TGCTGTTCTT TATACAGAGC TCTGAAATAT CTGTAGAAAG TGAGGTAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002559	Amborella trichopoda	67.51	1.00e-80	291.00
IUUC-Aly-006188	Arabidopsis lyrata	64.49	9.00e-73	265.00
IUUC-Ath-007356	Arabidopsis thaliana	65.31	4.00e-79	286.00
IUUC-Bdi-014859	Brachypodium distachyon	61.81	2.00e-73	268.00
IUUC-Bra-016936	Brassica rapa	65.42	1.00e-76	278.00
IUUC-Lma-053099	Leptosphaeria maculans	21.05	2.80e+00	25.40
IUUC-Mtr-058120	Medicago truncatula	66.27	2.00e-79	288.00
IUUC-Obr-076745	Oryza brachyantha	60.16	3.00e-68	250.00
IUUC-Ogl-077429	Oryza glaberrima	54.69	4.00e-61	226.00
IUUC-Pop-099516	Populus trichocarpa	77.29	3.00e-89	320.00
IUUC-Sly-111769	Solanum lycopersicum	67.06	1.00e-90	325.00
IUUC-Stu-112038	Solanum tuberosum	68.00	2.00e-88	317.00
IUUC-Tca-121261	Theobroma cacao	78.41	5.00e-95	339.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence