iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
HINT	Mentha
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/GAT	23.93	8.00e-15	77.00	IUUC-Sce-106195
UBD/Alpha-Helix/GAT	29.02	6.00e-30	128.00	IUUC-Ots-000031

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MVNAMVERAT SEMLIGPDWA MNLEICDMLN SDPAQAKDVV KGIKKRIGSR NPKAQLLALT 60
LLETIVKNCG DMVHMHVAEK GVIHEMVRIV KKKPDFHVKE KILVLIDTWQ EAFGGPRARY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACAAATTC TGAAAATTAA CAATTAGAGA AAAAGAAAAG AAAAGGAAAA AAAAAAGATT 60
TCTAGTAGAA AGAGAGAAGG GCGTGAATTC CTGAGCGAGA GATTCTTCGC CGGAGTAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR008942--ENTH_VHS
IPR004152--GAT_dom
IPR002014--VHS_dom

PROSITE

PS50909--GAT
PS50179--VHS

Pfam

PF03127--GAT
PF00790--VHS

SMART

SM00288--VHS

Gene Ontology

GO:0005622--C:intracellular
GO:0006886--P:intracellular protein transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000135	Aegilops tauschii	69.96	8.00e-100	357.00
IUUC-Aml-002171	Ailuropoda melanoleuca	31.80	9.00e-31	127.00
IUUC-Atr-003138	Amborella trichopoda	68.97	2.00e-113	402.00
IUUC-Apl-003931	Anas platyrhynchos	31.06	1.00e-30	127.00
IUUC-Aca-004547	Anolis carolinensis	32.08	6.00e-31	128.00
IUUC-Aly-005656	Arabidopsis lyrata	94.49	0.00e+00	1118.00
IUUC-Acl-008274	Aspergillus clavatus	35.53	1.00e-17	84.30
IUUC-Afl-008682	Aspergillus flavus	24.56	4.00e-19	89.40
IUUC-Afu-008774	Aspergillus fumigatus	34.21	5.00e-17	82.40
IUUC-Ani-009425	Aspergillus nidulans	24.60	1.00e-17	84.30
IUUC-Aor-010219	Aspergillus oryzae	24.56	8.00e-19	88.20
IUUC-Ate-010444	Aspergillus terreus	34.87	2.00e-17	83.20
IUUC-Ame-010695	Astyanax mexicanus	32.29	4.00e-35	141.00
IUUC-Bgr-012087	Blumeria graminis	34.75	7.00e-18	85.10
IUUC-Bta-012995	Bos taurus	32.66	1.00e-32	133.00
IUUC-Bci-013954	Botrytis cinerea	24.92	4.00e-19	89.40
IUUC-Bdi-015001	Brachypodium distachyon	51.80	1.00e-114	406.00
IUUC-Bol-015832	Brassica oleracea	87.21	0.00e+00	860.00
IUUC-Bra-017805	Brassica rapa	86.26	0.00e+00	879.00
IUUC-Cel-018158	Caenorhabditis elegans	27.19	5.00e-23	101.00
IUUC-Cja-019153	Callithrix jacchus	31.46	7.00e-29	120.00
IUUC-Cfa-020935	Canis familiaris	31.51	8.00e-31	127.00
IUUC-Cpo-021763	Cavia porcellus	32.04	3.00e-33	135.00
IUUC-Cre-022771	Chlamydomonas reinhardtii	37.25	1.00e-22	99.00
IUUC-Csa-023899	Chlorocebus sabaeus	32.14	1.00e-31	130.00
IUUC-Cho-024297	Choloepus hoffmanni	33.58	6.00e-17	81.60
IUUC-Cin-025779	Ciona intestinalis	29.56	3.00e-25	108.00
IUUC-Csv-026066	Ciona savignyi	24.49	3.00e-17	83.20
IUUC-Cgl-026560	Colletotrichum gloeosporioides	35.86	5.00e-18	85.90
IUUC-Cne-026931	Cryptococcus neoformans	23.53	5.00e-14	72.00
IUUC-Cme-027127	Cyanidioschyzon merolae	24.56	3.50e-01	30.40
IUUC-Dre-028784	Danio rerio	30.99	6.00e-35	141.00
IUUC-Dno-029588	Dasypus novemcinctus	31.29	3.00e-30	125.00
IUUC-Dor-030280	Dipodomys ordii	37.59	7.00e-26	112.00
IUUC-Dse-031238	Dothistroma septosporum	35.76	2.00e-19	90.50
IUUC-Dme-032144	Drosophila melanogaster	30.51	8.00e-34	137.00
IUUC-Ete-032235	Echinops telfairi	37.59	4.00e-25	109.00
IUUC-Eca-033664	Equus caballus	32.23	2.00e-30	125.00
IUUC-Eeu-034652	Erinaceus europaeus	38.85	1.00e-25	110.00
IUUC-Fca-036096	Felis catus	31.85	1.00e-31	130.00
IUUC-Fal-036951	Ficedula albicollis	31.33	8.00e-32	130.00
IUUC-Fox-037962	Fusarium oxysporum	37.76	2.00e-18	87.00
IUUC-Fso-038396	Fusarium solani	35.66	3.00e-17	83.20
IUUC-Gmo-039675	Gadus morhua	31.53	2.00e-32	133.00
IUUC-Ggr-039938	Gaeumannomyces graminis	38.13	7.00e-18	85.10
IUUC-Gga-040378	Gallus gallus	31.33	2.00e-31	129.00
IUUC-Gac-042470	Gasterosteus aculeatus	32.01	2.00e-34	139.00
IUUC-Gma-043377	Glycine max	54.75	5.00e-179	620.00
IUUC-Ggo-045180	Gorilla gorilla	32.14	2.00e-31	129.00
IUUC-Hsa-045697	Homo sapiens	32.14	2.00e-31	129.00
IUUC-Hvu-047351	Hordeum vulgare	57.92	5.00e-124	437.00
IUUC-Itr-048308	Ictidomys tridecemlineatus	31.77	2.00e-31	129.00
IUUC-Kpa-049359	Komagataella pastoris	26.26	1.00e-17	84.30
IUUC-Lch-049647	Latimeria chalumnae	31.77	2.00e-33	136.00
IUUC-Lpe-051451	Leersia perrieri	59.70	3.00e-109	388.00
IUUC-Loc-052081	Lepisosteus oculatus	32.32	3.00e-35	142.00
IUUC-Lma-053252	Leptosphaeria maculans	36.17	8.00e-18	85.10
IUUC-Laf-053664	Loxodonta africana	31.79	2.00e-31	129.00
IUUC-Mcc-055637	Macaca mulatta	32.14	1.00e-31	130.00
IUUC-Meu-056329	Macropus eugenii	38.30	1.00e-26	114.00
IUUC-Mor-057205	Magnaporthe oryzae	35.66	2.00e-16	80.50
IUUC-Mpo-057295	Magnaporthe poae	38.13	7.00e-18	85.50
IUUC-Mtr-058035	Medicago truncatula	60.97	3.00e-160	557.00
IUUC-Mga-059199	Meleagris gallopavo	31.95	3.00e-27	115.00
IUUC-Mmr-061193	Microcebus murinus	31.62	2.00e-29	123.00
IUUC-Mdo-061814	Monodelphis domestica	30.65	7.00e-30	124.00
IUUC-Mmu-063996	Mus musculus	31.82	1.00e-32	134.00
IUUC-Mac-064731	Musa acuminata	45.79	3.00e-138	485.00
IUUC-Mpu-065820	Mustela putorius furo	31.61	1.00e-30	127.00
IUUC-Mlu-067475	Myotis lucifugus	33.68	3.00e-31	128.00
IUUC-Nfi-068539	Neosartorya fischeri	33.99	3.00e-17	82.80
IUUC-Ncr-068726	Neurospora crassa	37.76	3.00e-18	86.70
IUUC-Nle-069131	Nomascus leucogenys	31.71	7.00e-27	114.00
IUUC-Opr-070780	Ochotona princeps	32.31	2.00e-31	129.00
IUUC-Ont-072357	Oreochromis niloticus	32.61	6.00e-34	138.00
IUUC-Oan-073103	Ornithorhynchus anatinus	30.64	5.00e-32	131.00
IUUC-Ocu-073922	Oryctolagus cuniculus	30.67	1.00e-29	123.00
IUUC-Oba-075564	Oryza barthii	52.93	1.00e-113	403.00
IUUC-Obr-076278	Oryza brachyantha	61.18	2.00e-126	445.00
IUUC-Ogl-077758	Oryza glaberrima	52.93	1.00e-113	403.00
IUUC-Ogu-078839	Oryza glumaepatula	61.20	1.00e-115	409.00
IUUC-Oin-079919	Oryza indica	52.93	1.00e-113	403.00
IUUC-Olo-080861	Oryza longistaminata	49.70	5.00e-110	390.00
IUUC-Ome-081795	Oryza meridionalis	57.82	1.00e-107	383.00
IUUC-Oni-082876	Oryza nivara	52.73	3.00e-113	401.00
IUUC-Opu-083285	Oryza punctata	58.62	1.00e-121	429.00
IUUC-Oru-084640	Oryza rufipogon	59.64	1.00e-113	403.00
IUUC-Osa-085855	Oryza sativa	52.93	1.00e-113	403.00
IUUC-Ola-087289	Oryzias latipes	32.30	1.00e-33	137.00
IUUC-Oga-088302	Otolemur garnettii	32.35	3.00e-30	125.00
IUUC-Oar-090246	Ovis aries	30.65	2.00e-29	123.00
IUUC-Ptr-091081	Pan troglodytes	32.14	2.00e-31	129.00
IUUC-Pan-092566	Papio anubis	32.14	1.00e-31	130.00
IUUC-Psi-093744	Pelodiscus sinensis	31.33	2.00e-31	129.00
IUUC-Pma-094514	Petromyzon marinus	30.57	4.00e-29	121.00
IUUC-Pno-095125	Phaeosphaeria nodorum	37.96	3.00e-17	82.80
IUUC-Ppa-095533	Physcomitrella patens	54.68	4.00e-83	301.00
IUUC-Pfo-096489	Poecilia formosa	33.44	2.00e-36	146.00
IUUC-Pab-098769	Pongo abelii	32.34	5.00e-31	128.00
IUUC-Pop-099695	Populus trichocarpa	57.53	6.00e-177	613.00
IUUC-Pca-100907	Procavia capensis	29.47	6.00e-25	107.00
IUUC-Ppe-101305	Prunus persica	63.90	9.00e-155	540.00
IUUC-Pva-102610	Pteropus vampyrus	30.45	2.00e-30	126.00
IUUC-Pgr-103677	Puccinia graminis	24.52	1.00e-17	84.00
IUUC-Ptt-103709	Puccinia triticina	28.45	8.00e-14	71.60
IUUC-Pte-104095	Pyrenophora teres	37.23	1.00e-18	87.80
IUUC-Pyt-104668	Pyrenophora triticirepentis	37.96	5.00e-19	89.00
IUUC-Rno-105379	Rattus norvegicus	32.14	2.00e-33	136.00
IUUC-Sce-106195	Saccharomyces cerevisiae	23.93	1.00e-15	77.40
IUUC-Sha-107255	Sarcophilus harrisii	34.47	3.00e-29	122.00
IUUC-Sja-107801	Schizosaccharomyces japonicus	29.45	4.00e-13	68.90
IUUC-Ssl-108525	Sclerotinia sclerotiorum	30.17	5.00e-15	75.50
IUUC-Smo-109345	Selaginella moellendorffii	53.05	1.00e-79	288.00
IUUC-Sit-109878	Setaria italica	45.01	2.00e-121	429.00
IUUC-Sly-111100	Solanum lycopersicum	60.11	7.00e-160	556.00
IUUC-Stu-112728	Solanum tuberosum	28.37	3.00e-23	102.00
IUUC-Sar-113393	Sorex araneus	36.23	3.00e-20	92.80
IUUC-Sbi-114137	Sorghum bicolor	57.60	7.00e-111	394.00
IUUC-Sre-115010	Sporisorium reilianum	35.14	3.00e-17	82.80
IUUC-Ssc-116377	Sus scrofa	25.55	3.00e-16	79.00
IUUC-Tgu-116705	Taeniopygia guttata	31.44	2.00e-31	129.00
IUUC-Tru-118023	Takifugu rubripes	32.26	2.00e-35	143.00
IUUC-Tsy-119264	Tarsius syrichta	25.90	4.00e-17	82.00
IUUC-Tni-120701	Tetraodon nigroviridis	32.70	3.00e-32	132.00
IUUC-Tca-121503	Theobroma cacao	66.09	3.00e-173	600.00
IUUC-Tre-122191	Trichoderma reesei	35.86	3.00e-18	86.70
IUUC-Tvi-122537	Trichoderma virens	31.69	1.00e-15	77.80
IUUC-Tae-124026	Triticum aestivum	55.04	2.00e-108	386.00
IUUC-Tur-126378	Triticum urartu	52.05	1.00e-105	376.00
IUUC-Tme-126914	Tuber melanosporum	39.01	2.00e-19	90.10
IUUC-Tbe-128123	Tupaia belangeri	33.33	7.00e-10	57.80
IUUC-Ttr-129095	Tursiops truncatus	37.59	6.00e-26	112.00
IUUC-Uma-129613	Ustilago maydis	34.82	9.00e-17	81.30
IUUC-Vda-129948	Verticillium dahliae	23.96	9.00e-16	78.20
IUUC-Vpa-130600	Vicugna pacos	35.29	3.00e-19	89.40
IUUC-Vvi-131122	Vitis vinifera	59.56	6.00e-149	520.00
IUUC-Xtr-132682	Xenopus tropicalis	30.94	7.00e-34	137.00
IUUC-Xma-134041	Xiphophorus maculatus	33.44	3.00e-36	145.00
IUUC-Yli-134682	Yarrowia lipolytica	32.89	4.00e-14	72.40
IUUC-Zma-134959	Zea mays	52.22	7.00e-122	430.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence