iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114366

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G171700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g022280	Sb04g022280.1	Sb04g022280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.70e-36	124.3	17	89

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +vp +f+CpIslelMrdPv++++G+tydr+sIe w+a+g++tcPvtr+pl++ +l+Pn+tlrrliq+wc +++
   Q: 17   QVPWYFRCPISLELMRDPVTVSTGQTYDRASIESWVATGNTTCPVTRAPLADFTLIPNHTLRRLIQEWCVAHR 89
           69*******************************************************************9997 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPGSVPLGLG LDTAGVQVPW YFRCPISLEL MRDPVTVSTG QTYDRASIES WVATGNTTCP 60
VTRAPLADFT LIPNHTLRRL IQEWCVAHRS MGVERIPTPK QPADPDLVRS LVAQGPGLPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGGGGA GCGTGCCGCT GGGTCTGGGC CTGGACACGG CGGGGGTGCA GGTGCCGTGG 60
TACTTCCGGT GCCCCATCTC CCTGGAGCTG ATGCGCGACC CGGTGACGGT GTCGACGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sbi:SORBI_04g022280

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000645	Aegilops tauschii	86.03	7.00e-143	499.00
IUUC-Atr-002952	Amborella trichopoda	50.48	1.00e-69	256.00
IUUC-Aly-005606	Arabidopsis lyrata	45.39	1.00e-80	292.00
IUUC-Ath-007142	Arabidopsis thaliana	46.57	1.00e-80	292.00
IUUC-Bdi-014994	Brachypodium distachyon	87.38	2.00e-126	444.00
IUUC-Bol-015539	Brassica oleracea	47.04	3.00e-68	251.00
IUUC-Bra-017123	Brassica rapa	47.28	1.00e-68	252.00
IUUC-Gma-044197	Glycine max	51.93	3.00e-97	347.00
IUUC-Hvu-047378	Hordeum vulgare	86.03	2.00e-144	504.00
IUUC-Lpe-050781	Leersia perrieri	85.33	8.00e-76	275.00
IUUC-Mtr-058307	Medicago truncatula	48.51	6.00e-82	296.00
IUUC-Mvi-060511	Microbotryum violaceum	41.18	2.00e-05	42.40
IUUC-Mac-065232	Musa acuminata	62.03	1.00e-78	286.00
IUUC-Oba-075168	Oryza barthii	89.78	1.00e-63	234.00
IUUC-Obr-076528	Oryza brachyantha	93.52	4.00e-60	224.00
IUUC-Ogl-077566	Oryza glaberrima	88.46	4.00e-73	267.00
IUUC-Ogu-078818	Oryza glumaepatula	88.46	7.00e-73	266.00
IUUC-Oin-079962	Oryza indica	88.46	6.00e-71	263.00
IUUC-Olo-080858	Oryza longistaminata	92.86	3.00e-43	164.00
IUUC-Oni-082172	Oryza nivara	77.94	2.00e-118	418.00
IUUC-Opu-083930	Oryza punctata	87.90	4.00e-75	273.00
IUUC-Oru-084509	Oryza rufipogon	77.94	2.00e-118	418.00
IUUC-Osa-085902	Oryza sativa	77.94	2.00e-118	418.00
IUUC-Pop-100012	Populus trichocarpa	51.68	4.00e-92	330.00
IUUC-Ppe-101571	Prunus persica	51.44	2.00e-82	298.00
IUUC-Smo-108904	Selaginella moellendorffii	47.99	1.00e-68	252.00
IUUC-Sit-110186	Setaria italica	91.95	1.00e-124	438.00
IUUC-Sly-111810	Solanum lycopersicum	51.08	6.00e-87	313.00
IUUC-Stu-112274	Solanum tuberosum	51.56	1.00e-88	319.00
IUUC-Sre-115187	Sporisorium reilianum	36.84	3.00e-06	45.10
IUUC-Tca-121177	Theobroma cacao	52.16	5.00e-100	357.00
IUUC-Tae-122743	Triticum aestivum	86.03	5.00e-147	513.00
IUUC-Tur-126112	Triticum urartu	86.52	2.00e-144	504.00
IUUC-Uma-129520	Ustilago maydis	38.10	3.00e-06	45.10
IUUC-Vvi-131329	Vitis vinifera	51.80	3.00e-80	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence