iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112274

Ensembl Protein ID

PGSC0003DMT400066588

UniProt Accession

M1CFU1; M1CFU1_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400025884	PGSC0003DMT400066588	PGSC0003DMT400066588

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.40e-35	120.5	13	85

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           ++p +f+CpIslelMrdPv++++G+tydr+sIe w+a+g+ tcPvtr+pl++ +l+Pn+tlrrliq+wc +n+
   Q: 13   QIPYHFRCPISLELMRDPVTVCTGQTYDRQSIESWVATGNITCPVTRAPLSDFTLIPNHTLRRLIQEWCVANR 85
           5899*****************************************************************9986 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MPGSLDPLDV GVQIPYHFRC PISLELMRDP VTVCTGQTYD RQSIESWVAT GNITCPVTRA 60
PLSDFTLIPN HTLRRLIQEW CVANRAFGVE RIPTPKQPAD PSLVRSLLNQ AAAQSNHMNS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCATTAAA AGCTGAACTC CCTCGGTTCT ACGTGGGTCC GTGCTTGGGC ATGAGTTCAA 60
TAATAGATGA ATGCATGATG TATTGTATTT GTGCTTAATC GAATTGGACC ATTCAAATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102587805

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000645	Aegilops tauschii	50.00	1.00e-79	288.00
IUUC-Atr-002952	Amborella trichopoda	58.12	9.00e-116	409.00
IUUC-Aly-005606	Arabidopsis lyrata	66.03	9.00e-139	485.00
IUUC-Ath-006933	Arabidopsis thaliana	66.90	6.00e-133	466.00
IUUC-Bdi-014994	Brachypodium distachyon	64.97	4.00e-53	201.00
IUUC-Bol-015539	Brassica oleracea	67.85	1.00e-132	464.00
IUUC-Bra-017123	Brassica rapa	68.09	3.00e-132	463.00
IUUC-Gma-044197	Glycine max	75.06	2.00e-172	597.00
IUUC-Hvu-047378	Hordeum vulgare	50.00	2.00e-80	291.00
IUUC-Lpe-050781	Leersia perrieri	68.32	5.00e-55	206.00
IUUC-Mtr-058307	Medicago truncatula	71.39	1.00e-154	538.00
IUUC-Mac-064526	Musa acuminata	51.27	4.00e-64	237.00
IUUC-Oba-075168	Oryza barthii	68.28	4.00e-49	186.00
IUUC-Obr-076528	Oryza brachyantha	79.63	2.00e-48	185.00
IUUC-Ogl-077566	Oryza glaberrima	63.19	6.00e-52	196.00
IUUC-Ogu-078818	Oryza glumaepatula	63.19	1.00e-51	195.00
IUUC-Oin-079962	Oryza indica	63.19	8.00e-50	193.00
IUUC-Oni-082172	Oryza nivara	63.19	6.00e-52	196.00
IUUC-Opu-083930	Oryza punctata	65.43	4.00e-55	207.00
IUUC-Oru-084509	Oryza rufipogon	63.19	6.00e-52	196.00
IUUC-Osa-085902	Oryza sativa	63.19	6.00e-52	196.00
IUUC-Pop-100012	Populus trichocarpa	78.55	4.00e-171	592.00
IUUC-Ppe-101571	Prunus persica	75.48	2.00e-157	547.00
IUUC-Smo-108904	Selaginella moellendorffii	48.17	5.00e-71	260.00
IUUC-Sit-110186	Setaria italica	65.38	1.00e-52	199.00
IUUC-Sly-111810	Solanum lycopersicum	97.11	0.00e+00	745.00
IUUC-Sbi-114366	Sorghum bicolor	64.20	8.00e-55	206.00
IUUC-Tca-121177	Theobroma cacao	76.20	0.00e+00	636.00
IUUC-Tae-122743	Triticum aestivum	50.12	4.00e-82	297.00
IUUC-Tur-126112	Triticum urartu	50.24	2.00e-80	291.00
IUUC-Vvi-131329	Vitis vinifera	77.59	1.00e-176	610.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence