iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114101

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G178400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g022820	Sb04g022820.1	Sb04g022820.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.00e-08	34.8	99	141

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl d+   ++  ++ pCgH+fh +C+ +w       s++ +CPlCr
   Q: 99   CSVCLADYqpdERLQKIPPCGHTFHISCIDHW------LSTNTTCPLCR 141
           99**999977544233566*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSCTSPDPPD YCSAESPELK LYQAFIFSVP VFFTFVLLLF FYLFYLRRRR ANWQSLRMRT 60
NNLIRGDNAR LECGLKKEMR EMLPVVIFKE SFLIRETQCS VCLADYQPDE RLQKIPPCGH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTGCA CCTCTCCAGA TCCACCAGAC TACTGCTCAG CCGAGTCGCC TGAGCTCAAG 60
CTGTACCAGG CCTTCATCTT CTCGGTGCCT GTCTTCTTTA CGTTCGTCTT GCTTCTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_04g022820

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005500	Arabidopsis lyrata	50.91	1.00e-39	155.00
IUUC-Ath-007076	Arabidopsis thaliana	50.00	1.00e-39	155.00
IUUC-Bdi-014087	Brachypodium distachyon	76.15	3.00e-82	296.00
IUUC-Bol-016221	Brassica oleracea	61.65	1.00e-39	155.00
IUUC-Bra-017017	Brassica rapa	55.05	2.00e-33	134.00
IUUC-Gma-043458	Glycine max	58.04	3.00e-35	140.00
IUUC-Lpe-051002	Leersia perrieri	77.82	2.00e-87	313.00
IUUC-Meu-056359	Macropus eugenii	42.50	1.00e-14	73.60
IUUC-Mtr-058067	Medicago truncatula	60.71	8.00e-40	155.00
IUUC-Mdo-061961	Monodelphis domestica	41.25	4.00e-14	72.40
IUUC-Mac-065514	Musa acuminata	67.51	1.00e-60	225.00
IUUC-Mpu-066539	Mustela putorius furo	42.50	1.00e-14	73.60
IUUC-Oba-075393	Oryza barthii	77.73	3.00e-89	320.00
IUUC-Obr-076149	Oryza brachyantha	75.31	8.00e-86	308.00
IUUC-Ogl-077140	Oryza glaberrima	77.73	3.00e-89	320.00
IUUC-Ogu-078926	Oryza glumaepatula	77.73	3.00e-89	320.00
IUUC-Oin-080003	Oryza indica	71.27	2.00e-68	250.00
IUUC-Ome-081399	Oryza meridionalis	76.89	1.00e-87	314.00
IUUC-Oni-082750	Oryza nivara	77.73	6.00e-89	319.00
IUUC-Opu-083446	Oryza punctata	77.31	9.00e-89	318.00
IUUC-Oru-084873	Oryza rufipogon	77.73	3.00e-89	320.00
IUUC-Osa-085898	Oryza sativa	77.73	3.00e-89	320.00
IUUC-Pop-099279	Populus trichocarpa	52.90	5.00e-26	110.00
IUUC-Ppe-101232	Prunus persica	57.26	8.00e-38	149.00
IUUC-Pgr-103602	Puccinia graminis	48.15	3.00e-10	57.80
IUUC-Smo-109214	Selaginella moellendorffii	47.37	3.00e-25	107.00
IUUC-Sit-110610	Setaria italica	89.13	3.00e-99	353.00
IUUC-Sly-111610	Solanum lycopersicum	60.84	5.00e-40	157.00
IUUC-Stu-112875	Solanum tuberosum	60.84	2.00e-39	155.00
IUUC-Tca-121298	Theobroma cacao	63.09	8.00e-42	163.00
IUUC-Tae-123494	Triticum aestivum	70.04	2.00e-73	267.00
IUUC-Tur-126109	Triticum urartu	69.60	5.00e-73	266.00
IUUC-Vvi-131331	Vitis vinifera	69.40	8.00e-42	162.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence