iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099246

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000339

Gene Name

POPTRDRAFT_799777; POPTR_0003s09190g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s09190	POPTR_0003s09190.1	POPTR_0003s09190.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.50e-07	30.9	144	186

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++  ++lp C H+fh  C+  w       + + +CPlCr
   Q: 144  CSVCLSEFeeDESIRLLPkCSHAFHVPCIDTW------LRSHSNCPLCR 186
           ********7655599999**************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MASLDAPQTW IPHVNIKDCS QGFCSLYCPQ WCYIISPPPP PFEFPDDDSS PIFSPLVIAI 60
IGILASAFLL VCYYTIISKY CGNDYSARRR DQNHGQNEEF EDDHNSSLHE PWHAATTGVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCATCTC TAGACGCCCC CCAAACTTGG ATTCCACACG TGAACATTAA AGACTGTTCT 60
CAAGGATTTT GTAGCTTATA CTGCCCACAA TGGTGTTACA TCATCTCCCC TCCTCCGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0003s09190g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047701	Hordeum vulgare	46.45	3.00e-62	231.00
IUUC-Lpe-051459	Leersia perrieri	51.61	8.00e-63	233.00
IUUC-Oba-075056	Oryza barthii	52.05	6.00e-59	220.00
IUUC-Obr-076311	Oryza brachyantha	40.11	1.00e-59	223.00
IUUC-Ogl-077644	Oryza glaberrima	52.05	5.00e-59	221.00
IUUC-Ogu-078989	Oryza glumaepatula	51.23	9.00e-59	220.00
IUUC-Oin-079716	Oryza indica	52.05	6.00e-59	220.00
IUUC-Olo-081066	Oryza longistaminata	50.61	3.00e-61	228.00
IUUC-Ome-081279	Oryza meridionalis	52.46	3.00e-59	221.00
IUUC-Oni-082896	Oryza nivara	52.05	6.00e-59	220.00
IUUC-Opu-083796	Oryza punctata	52.10	3.00e-58	218.00
IUUC-Oru-084594	Oryza rufipogon	52.46	2.00e-59	222.00
IUUC-Osa-086004	Oryza sativa	52.46	2.00e-59	222.00
IUUC-Smo-108989	Selaginella moellendorffii	41.22	9.00e-23	99.40
IUUC-Sit-109894	Setaria italica	57.50	6.00e-59	220.00
IUUC-Sly-110835	Solanum lycopersicum	50.14	7.00e-79	286.00
IUUC-Stu-112220	Solanum tuberosum	52.56	3.00e-80	291.00
IUUC-Sbi-114789	Sorghum bicolor	53.28	2.00e-60	225.00
IUUC-Tru-118126	Takifugu rubripes	38.75	8.00e-13	68.20
IUUC-Tae-124557	Triticum aestivum	45.99	4.00e-59	221.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence