iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114725

Ensembl Protein ID

Sb08g020580.1

UniProt Accession

C5YRE2; C5YRE2_SORBI

Genbank Protein ID

EES17334.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G156900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g020580	Sb08g020580.1	Sb08g020580.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.20e-16	61.4	166	262

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt......................elknsevalkYeDedGDlvtlksDedldkavsllaskks 75
           +vkvs++g+++++++dl+ + ++++L ka+++ +                        l++se+ ++YeD+dGD++ l++D++++++v+      s
   Q: 166  FVKVSLDGAPYLRKVDLKMYKSYQELSKALEKmFSsftigscgsqgmngmnesklvdLLNGSEYVPTYEDKDGDWM-LVGDVPWEMFVE------S 254
           8*******************************622566999***************99999***************.************......* PP
   S: 76   llrlliqk 83
           ++rl+i+k
   Q: 255  CKRLRIMK 262
           *******8 PP

Organism

Sorghum bicolor

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MATTDLGFEE TELRLGLPGG GGEVVGEGRS SVVSSGKRGF AETIDLKLKL EPATPAAVLK 60
AAEADEHQDG VAAAKEDAGC VAAAEEAAVG GKMKRSPSQS SVVTAAAVQA DPAEKPRAPK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCGTGGTCG TGGCCCCTCT TCCCAATCCC CTTGCATTTG CAAAGCCTCC TCCTTTACAT 60
TTGCAAAGCC AGCCGGCCTC CTCGTCCTGG CTCGCAAGCA AAGCAAAGCA AACGAAGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sbi:SORBI_08g020580

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002559	Amborella trichopoda	59.20	7.00e-77	278.00
IUUC-Aca-004830	Anolis carolinensis	32.08	9.80e-02	29.60
IUUC-Aly-006188	Arabidopsis lyrata	68.29	6.00e-59	219.00
IUUC-Ath-007356	Arabidopsis thaliana	71.34	7.00e-64	235.00
IUUC-Bdi-014859	Brachypodium distachyon	80.63	3.00e-81	293.00
IUUC-Bol-016371	Brassica oleracea	54.80	2.00e-64	237.00
IUUC-Bra-016936	Brassica rapa	71.70	2.00e-62	231.00
IUUC-Gma-044404	Glycine max	79.50	5.00e-68	249.00
IUUC-Hvu-047087	Hordeum vulgare	82.72	6.00e-74	268.00
IUUC-Lpe-050724	Leersia perrieri	56.45	2.00e-53	201.00
IUUC-Loc-052748	Lepisosteus oculatus	28.83	8.10e-01	28.10
IUUC-Mtr-058641	Medicago truncatula	58.96	2.00e-69	254.00
IUUC-Mac-064520	Musa acuminata	64.14	6.00e-78	282.00
IUUC-Oba-075945	Oryza barthii	73.36	1.00e-84	305.00
IUUC-Obr-076745	Oryza brachyantha	66.27	3.00e-79	287.00
IUUC-Ogu-078911	Oryza glumaepatula	72.51	9.00e-88	315.00
IUUC-Oin-079136	Oryza indica	72.02	3.00e-83	300.00
IUUC-Oni-082674	Oryza nivara	72.65	1.00e-84	305.00
IUUC-Osa-086164	Oryza sativa	72.02	3.00e-83	300.00
IUUC-Ppa-095740	Physcomitrella patens	41.48	5.00e-31	128.00
IUUC-Pfo-096634	Poecilia formosa	27.93	1.10e+00	27.70
IUUC-Pop-099218	Populus trichocarpa	59.68	1.00e-74	271.00
IUUC-Ppe-101719	Prunus persica	58.63	3.00e-69	253.00
IUUC-Smo-109586	Selaginella moellendorffii	47.51	1.00e-36	146.00
IUUC-Sit-110063	Setaria italica	79.29	8.00e-102	362.00
IUUC-Sly-111769	Solanum lycopersicum	57.71	1.00e-73	268.00
IUUC-Stu-112038	Solanum tuberosum	58.63	1.00e-72	265.00
IUUC-Tca-121532	Theobroma cacao	61.85	4.00e-74	270.00
IUUC-Tre-122196	Trichoderma reesei	34.62	1.00e+00	27.70
IUUC-Tae-124253	Triticum aestivum	73.14	3.00e-86	310.00
IUUC-Tur-126762	Triticum urartu	65.66	2.00e-74	271.00
IUUC-Vvi-131348	Vitis vinifera	75.58	1.00e-70	257.00
IUUC-Xma-134033	Xiphophorus maculatus	30.61	1.50e+00	27.30

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence