iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112901

Ensembl Protein ID

PGSC0003DMT400042074

UniProt Accession

M1BCG5; M1BCG5_SOLTU

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400016317	PGSC0003DMT400042073	PGSC0003DMT400042073
PGSC0003DMG400016317	PGSC0003DMT400042074	PGSC0003DMT400042074

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	3.00e-16	60.6	94	179

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrl 79
           + vkvs++g+++++++dl+   ++ +Llka+++ ++          ++k+se+a+ YeD+dGDl+ l++D+++++++s      s++rl
   Q: 94   MYVKVSMDGAPYLRKIDLKLCKGYPELLKALEKmFKlsigeysereGYKGSEFAPAYEDKDGDLM-LVGDVPFEMFLS------SCKRL 175
           579******************************6448899999999*******************.************......***** PP
   S: 80   liqk 83
           +i+k
   Q: 176  RIMK 179
           ***8 PP

Organism

Solanum tuberosum

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MECVLAHEKD LNLKATELRL GLPGRTDEES DKEIVFNVKN NKRALPEDED CESNSISDSK 60
TPPVAKTQIV GWPPVRSNRK NSFPSKKAEA ECGMYVKVSM DGAPYLRKID LKLCKGYPEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCTCTCTA TACAACTCTC TTATTTCACT TTCTCCTTAT ATATTACAAC AAGCCACCAT 60
TAAGCATCTT CAAATCAATC TTGAAGAAGA AAAACAAAAG TCTTGGAGAA GGAAACTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sot:102586390

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bgr-012301	Blumeria graminis	38.46	7.30e-02	30.80
IUUC-Ggo-045067	Gorilla gorilla	29.73	3.00e-01	27.30
IUUC-Lpe-051475	Leersia perrieri	45.32	4.00e-36	142.00
IUUC-Lma-053299	Leptosphaeria maculans	29.82	1.10e+00	24.30
IUUC-Ptt-103794	Puccinia triticina	45.83	3.20e-02	32.70
IUUC-Sly-111301	Solanum lycopersicum	97.37	2.00e-106	376.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence