iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099012

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000341

Gene Name

POPTRDRAFT_558588; POPTR_0005s08300g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s08300	POPTR_0005s08300.1	POPTR_0005s08300.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.70e-09	36.7	76	118

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f++g  ++ l C+H+fh+dCl  w     +++  ++CPlCr
   Q: 76   CAVCLSEFSEGesVRKLKCKHTFHKDCLDEW-----LQQCLATCPLCR 118
           ********66555******************.....6777889****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MASLSEFFSH LYTMAIVFLS LLLLEIVILI RSVIGSTLKS DKPIISTTQY LRHIEEKNPT 60
ISYSKQLMRQ QDSIECAVCL SEFSEGESVR KLKCKHTFHK DCLDEWLQQC LATCPLCRAK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCTTTTAAA CCTAATCAGG GATAATTCTA TGCCAAGATT CCACATGTCA CCACTTTAGT 60
TAGGTCACAT GCATTCTCAA CAAGTTCGGA AGTGAACATT AAGTATACCA AAGCCTGATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0005s08300g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051646	Leersia perrieri	56.00	1.00e-14	71.20
IUUC-Mtr-058299	Medicago truncatula	54.55	2.00e-34	137.00
IUUC-Mla-059167	Melampsora laricipopulina	40.32	5.00e-10	59.30
IUUC-Obr-076744	Oryza brachyantha	53.85	2.00e-14	70.10
IUUC-Olo-080984	Oryza longistaminata	40.24	1.00e-14	71.20
IUUC-Ppe-101751	Prunus persica	58.90	1.00e-49	188.00
IUUC-Pgr-103420	Puccinia graminis	48.98	3.00e-12	67.40
IUUC-Sly-111375	Solanum lycopersicum	54.55	1.00e-38	151.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence