iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005829

UUCD1 version

UUC-ArL-00800

Ensembl Protein ID

fgenesh1_pg.C_scaffold_6000838

UniProt Accession

D7M2W5; D7M2W5_ARALL

Genbank Protein ID

EFH47678.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348718

Gene Name

RING1; ARALYDRAFT_350245

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pg.C_scaffold_6000838	fgenesh1_pg.C_scaffold_6000838	fgenesh1_pg.C_scaffold_6000838

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-07	33.1	139	181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++lp C H+fh +C+  w         + +CPlCr
   Q: 139  CSVCLNEFeeDESLRLLPkCSHAFHINCIDTW------LLSHKNCPLCR 181
           ********7655599999**************......888999****8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEFNNRKTLF CYLPVKDFKS PIFIPCFQTS PPPPPPPPQR ELSLLLPTSI CVVGSVILFL 60
FLVVFLYLYI TQPRWNSAAT VTPGDTGQRE NEDETEERDH SDFHHVWRIP TVGLHRSAIN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTTTA ATAACAGAAA GACGCTCTTT TGTTATCTAC CGGTCAAAGA TTTTAAGTCG 60
CCGATCTTTA TCCCTTGTTT CCAGACTTCC CCTCCGCCGC CACCACCACC GCCACAGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0043068--P:positive regulation of programmed cell death
GO:0051865--P:protein autoubiquitination
GO:0009617--P:response to bacterium
GO:0010200--P:response to chitin
GO:0002238--P:response to molecule of fungal origin

KEGG

aly:ARALYDRAFT_350245

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006749	Arabidopsis thaliana	82.74	2.00e-107	381.00
IUUC-Bol-015095	Brassica oleracea	53.36	1.00e-48	185.00
IUUC-Bra-017929	Brassica rapa	67.11	9.00e-54	202.00
IUUC-Gma-043544	Glycine max	81.71	3.00e-36	144.00
IUUC-Lpe-051048	Leersia perrieri	58.54	2.00e-27	116.00
IUUC-Mga-059708	Meleagris gallopavo	36.17	2.00e-13	69.30
IUUC-Obr-076146	Oryza brachyantha	57.47	5.00e-27	114.00
IUUC-Pop-098897	Populus trichocarpa	44.66	2.00e-37	149.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence