iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057999

Ensembl Protein ID

KEH20780

UniProt Accession

A0A072U4M7; A0A072U4M7_MEDTR

Genbank Protein ID

KEH20780.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g089880

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g089880	KEH20780	KEH20780

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-07	32.7	153	195

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl +f  ++ +++lp C H+fh  C+  w       s + +CPlCr
   Q: 153  CSVCLGEFqeEESLRILPkCSHAFHIPCIDTW------LSSHKNCPLCR 195
           ********5544499999**************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MVFHLRNLLH FYYHDSPNPS PQQSPVTYTP YNILHHFHIH DIHTLRIAMM AMACFVTTIM 60
LFFFFFISIR NYQSRRHNHT RDRRNTPVLF DVHGYRDSTI SNDDDDDNDG DERVIVDHPI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTTTTC ATCTTAGAAA TCTCCTTCAT TTCTATTACC ATGATAGCCC AAACCCTTCT 60
CCTCAACAAT CACCTGTTAC ATACACTCCC TATAACATAC TTCATCATTT CCATATCCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_8g089880

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014119	Brachypodium distachyon	57.89	1.00e-27	116.00
IUUC-Gmo-039344	Gadus morhua	43.53	6.00e-14	72.00
IUUC-Gma-043544	Glycine max	48.47	3.00e-50	191.00
IUUC-Lpe-051048	Leersia perrieri	62.20	7.00e-30	124.00
IUUC-Ogl-077013	Oryza glaberrima	59.55	6.00e-26	111.00
IUUC-Ogu-078886	Oryza glumaepatula	58.43	1.00e-25	110.00
IUUC-Oin-079205	Oryza indica	59.55	6.00e-26	111.00
IUUC-Ome-081516	Oryza meridionalis	59.55	4.00e-26	112.00
IUUC-Oni-082231	Oryza nivara	59.55	5.00e-26	111.00
IUUC-Oru-085019	Oryza rufipogon	59.55	6.00e-26	111.00
IUUC-Osa-085718	Oryza sativa	59.55	4.00e-26	112.00
IUUC-Pop-098897	Populus trichocarpa	45.61	4.00e-46	178.00
IUUC-Tca-120978	Theobroma cacao	61.94	9.00e-45	173.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence