iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114872

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G100200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g018375	Sb06g018375.1	Sb06g018375.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.50e-07	30.8	203	245

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl +f+dg  +++lp C H+fh  C+  w       + + +CP+Cr
   Q: 203  CSVCLGEFQDGelVRLLPkCAHAFHVPCIDTW------LRAHVNCPICR 245
           ********9988899999**************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MRPHRRALFP GAGDCEDPWS AGCQTPPPVP SSLDYGPGPS PSLPPFAGIP LCPPLLQPSP 60
APAHNGRRDQ GGGMQQGYGP PPPGVGGDAD DHARRHFVKY ALIAAGVIAF VSLILLGVSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCGCGCTG CGGCGATCCA GCAGGCAGCC CCTCCCCCAG TCAGTCCACG CACCGCCACA 60
GCCGTGCCGT CCCCGTCCCC GTCCAGTCCA CGCACTCACG TTAAGGAACC GAGTCCCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_06g018375

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006089	Arabidopsis lyrata	57.14	7.00e-27	113.00
IUUC-Ath-007027	Arabidopsis thaliana	56.47	6.00e-27	114.00
IUUC-Bdi-014119	Brachypodium distachyon	60.54	3.00e-53	201.00
IUUC-Bol-016093	Brassica oleracea	61.73	1.00e-27	115.00
IUUC-Bra-017727	Brassica rapa	61.90	2.00e-28	119.00
IUUC-Lpe-051048	Leersia perrieri	86.59	1.00e-40	159.00
IUUC-Mac-064782	Musa acuminata	74.12	4.00e-35	140.00
IUUC-Oba-075433	Oryza barthii	50.57	1.00e-45	176.00
IUUC-Ogl-077013	Oryza glaberrima	52.87	4.00e-38	151.00
IUUC-Ogu-078886	Oryza glumaepatula	52.49	5.00e-38	150.00
IUUC-Oin-079205	Oryza indica	87.64	2.00e-34	139.00
IUUC-Ome-081516	Oryza meridionalis	52.87	1.00e-38	153.00
IUUC-Oni-082231	Oryza nivara	52.49	1.00e-38	152.00
IUUC-Opu-084102	Oryza punctata	70.24	8.00e-47	180.00
IUUC-Oru-085019	Oryza rufipogon	52.87	3.00e-38	151.00
IUUC-Osa-085718	Oryza sativa	88.64	8.00e-35	140.00
IUUC-Ppe-101356	Prunus persica	59.55	7.00e-31	126.00
IUUC-Sit-110484	Setaria italica	62.83	8.00e-47	180.00
IUUC-Sly-111280	Solanum lycopersicum	59.76	2.00e-28	119.00
IUUC-Tae-123532	Triticum aestivum	87.91	3.00e-44	171.00
IUUC-Uma-129481	Ustilago maydis	53.19	1.00e-11	66.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence