iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131123

UUCD1 version

UUC-ViV-00521

Ensembl Protein ID

VIT_19s0014g02900.t01

UniProt Accession

F6H256; F6H256_VITVI

Genbank Protein ID

CCB46352.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595229

Gene Name

ATRMA3; VIT_19s0014g02900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_19s0014g02900	VIT_19s0014g02900.t01	VIT_19s0014g02900.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.90e-08	34.3	120	167
E3 activity/RING/U-box	4.70e-07	30.3	117	178

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...pglknssskefrCPlCr 46
           C iCl++  d p+v+ CgH+++  C++kw   +  + ++ ++++CP+C+
   Q: 120  CNICLDSAHD-PVVTLCGHLYCWPCIYKWlhvQSTSPVTEQQQNCPVCK 167
           99********.9999**************999777778999999****7 PP

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk........tcPvtrqplteedlvPn 58
            f C I l+  +dPvv+ +G+ y   +I kwl  + +         cPv+++ +++++lvP 
   Q: 117  SFDCNICLDSAHDPVVTLCGHLYCWPCIYKWLHVQSTspvteqqqNCPVCKANISHTSLVPL 178
           599*****************************77766677777889*************996 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSGWKLENGQ HQPIGEELQF AVSRRKTRSA PLSLYTTPFF IAGHHLSLLR SLFAVRILLR 60
SNRFRVLHPC FDSDRMALEQ DFPELAAQHE SDGDVSLQKK WKAISASEAA SENSNGSFDC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTGGGT GGAAGTTAGA AAATGGTCAA CATCAACCAA TAGGAGAAGA GCTTCAGTTT 60
GCCGTTTCAA GACGTAAAAC GCGCTCCGCC CCGCTGTCTT TATATACAAC GCCCTTTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000767	Aegilops tauschii	39.34	1.00e-30	125.00
IUUC-Aly-006090	Arabidopsis lyrata	42.74	3.00e-45	173.00
IUUC-Bdi-014949	Brachypodium distachyon	40.51	9.00e-29	119.00
IUUC-Gma-044283	Glycine max	53.45	1.00e-62	231.00
IUUC-Hvu-047276	Hordeum vulgare	39.26	2.00e-31	128.00
IUUC-Lpe-051528	Leersia perrieri	39.57	5.00e-27	114.00
IUUC-Mac-065357	Musa acuminata	38.03	6.00e-32	129.00
IUUC-Oba-075301	Oryza barthii	51.00	4.00e-20	90.90
IUUC-Obr-076866	Oryza brachyantha	39.81	2.00e-26	111.00
IUUC-Ome-081484	Oryza meridionalis	51.00	1.00e-19	90.10
IUUC-Oru-085110	Oryza rufipogon	51.00	7.00e-20	90.10
IUUC-Osa-085456	Oryza sativa	51.00	7.00e-20	90.10
IUUC-Pop-099944	Populus trichocarpa	57.49	6.00e-72	263.00
IUUC-Sit-110543	Setaria italica	38.33	5.00e-30	123.00
IUUC-Sly-111596	Solanum lycopersicum	49.06	7.00e-56	209.00
IUUC-Stu-112089	Solanum tuberosum	48.03	2.00e-57	214.00
IUUC-Tca-121161	Theobroma cacao	55.51	3.00e-71	260.00
IUUC-Tae-123926	Triticum aestivum	40.74	2.00e-33	135.00
IUUC-Tur-126644	Triticum urartu	58.12	1.00e-29	123.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence