iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113798

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G193000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g026580	Sb06g026580.1	Sb06g026580.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.80e-11	42.8	115	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f++g   +vlp CgH+fha C+ kw       +++ +CP Cr
   Q: 115  CAICLAEFEEGesMRVLPqCGHAFHAACIDKW------LRGHSSCPSCR 157
           ********77666999999*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MHGAARKLLM WGSSPVGAAG SDRPDDHDVV IVLASLLCAL ITVLGIGLVA RCACGRGGPR 60
ARAAAAANRG VKKSVLRKIP TVPYVAPAPA CAAGGGDVES GEPAAEAGEA EAAECAICLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCACGGCG CGGCGAGGAA GCTGCTGATG TGGGGGAGCA GCCCGGTGGG GGCGGCGGGG 60
TCGGACAGGC CCGACGACCA CGACGTCGTG ATCGTGCTCG CCTCGCTGCT GTGCGCGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_06g026580

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051468	Leersia perrieri	58.88	2.00e-40	157.00
IUUC-Oba-075661	Oryza barthii	61.93	7.00e-42	162.00
IUUC-Ogu-078487	Oryza glumaepatula	63.96	1.00e-41	161.00
IUUC-Oin-079257	Oryza indica	80.56	7.00e-29	117.00
IUUC-Ome-081259	Oryza meridionalis	63.45	2.00e-41	161.00
IUUC-Oni-082846	Oryza nivara	63.96	1.00e-41	161.00
IUUC-Opu-083570	Oryza punctata	64.32	4.00e-39	153.00
IUUC-Oru-084540	Oryza rufipogon	63.96	1.00e-41	161.00
IUUC-Sit-110316	Setaria italica	72.14	1.00e-55	208.00
IUUC-Tae-124139	Triticum aestivum	67.66	4.00e-40	156.00
IUUC-Tur-125990	Triticum urartu	67.07	4.00e-40	156.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence