iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109237

Ensembl Protein ID

EFJ05695

UniProt Accession

D8TCD6; D8TCD6_SELML

Genbank Protein ID

EFJ05695.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377716

Gene Name

SELMODRAFT_187338

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_187338	EFJ05695	EFJ05695

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.50e-09	37.1	186	236

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C +C++++++++  + C+ Cr+w+H  C+k +  ++  + + + Cp+C +
   Q: 186  AFCGICADPHNTSQFWIACDSCRKWYHGSCVKVN-ASKAAGIKSYNCPSCAK 236
           79********************************.999999999******86 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MESPATVEAI FEDFRGRRAG IVKALTTDVS IFCDECDPVK DLCLYGLPDG EWKVTLPVEE 60
VPPELPEPSL GINFAKDGMK RTDWLILVAV HSDSWLYSVA FYHAARLHKA DRQRLFGMIN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGACGATGG AGTCGCCCGC GACTGTGGAG GCGATCTTCG AGGATTTCCG GGGCAGGCGC 60
GCGGGGATCG TCAAGGCGCT CACAACGGGT AGGATTTTGA TCGATCCATT CTCTCATCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

smo:SELMODRAFT_187338

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001165	Aegilops tauschii	43.77	8.00e-50	189.00
IUUC-Atr-002475	Amborella trichopoda	49.58	3.00e-54	203.00
IUUC-Aly-005868	Arabidopsis lyrata	51.67	8.00e-50	189.00
IUUC-Ath-007447	Arabidopsis thaliana	51.67	4.00e-50	190.00
IUUC-Bdi-014258	Brachypodium distachyon	49.19	2.00e-53	201.00
IUUC-Bol-015206	Brassica oleracea	52.28	9.00e-51	192.00
IUUC-Bra-016659	Brassica rapa	52.70	2.00e-51	194.00
IUUC-Cin-025225	Ciona intestinalis	48.15	3.00e-13	69.70
IUUC-Gma-043342	Glycine max	52.67	1.00e-51	195.00
IUUC-Hvu-047100	Hordeum vulgare	48.78	1.00e-54	205.00
IUUC-Lpe-050738	Leersia perrieri	50.00	2.00e-55	208.00
IUUC-Meu-056467	Macropus eugenii	36.00	5.00e-03	37.00
IUUC-Mac-064648	Musa acuminata	50.00	1.00e-53	202.00
IUUC-Oba-075021	Oryza barthii	65.12	9.00e-34	136.00
IUUC-Ome-081881	Oryza meridionalis	50.00	1.00e-49	189.00
IUUC-Osa-085794	Oryza sativa	65.65	2.00e-36	145.00
IUUC-Ppa-095906	Physcomitrella patens	50.62	6.00e-56	209.00
IUUC-Pop-099768	Populus trichocarpa	50.61	1.00e-51	195.00
IUUC-Ppe-101390	Prunus persica	50.20	3.00e-50	190.00
IUUC-Sit-110822	Setaria italica	64.89	3.00e-36	144.00
IUUC-Sly-111474	Solanum lycopersicum	52.67	1.00e-52	198.00
IUUC-Stu-112822	Solanum tuberosum	52.07	9.00e-52	195.00
IUUC-Tca-121679	Theobroma cacao	52.70	2.00e-51	194.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence