iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114477

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G065800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g005680	Sb10g005680.1	Sb10g005680.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.20e-83	281.9	91	393

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           Gl+NlgNtCY+NSvLQcL+ +++++ +l + k+k++++++       + l++lq+ ++  ++s+ k v+p +++k l+ +++ f++++q+Da+E++
   Q: 91   GLENLGNTCYLNSVLQCLTYTEPFAAYLQSgKHKSSCRAS-----GFCALCALQNHVKTALESTGKIVTPFRIVKNLRCISRTFRNSRQEDAHELM 181
           9*****************************7777777655.....67999********************************************** PP
   S: 97   aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLe 192
             ll+++++ +                   s   +e++    ksl++++F+g+l+sq+kc +c + s++++pfldlsl++ + +     +l  +Le
   Q: 182  VNLLESMHKCC-----------------LPSGVPSESQSAYDKSLVHKIFGGRLRSQVKCTRCSHCSNKFDPFLDLSLDIAKAT-----TLVRALE 255
           ***********.................122334557788899****************************************9.....9****** PP
   S: 193  sftkeeelegenk.yycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHs 287
           +ft+ e l+g +k y+ce+c++k+ a+k+++++k P+vL++hLkRf  s   + reki+kkv+f  +Ldl+pf+++++ +   + kY+L++v+vH+
   Q: 256  NFTEDELLDGGQKqYQCERCRQKVVAKKRFTIDKAPNVLTIHLKRF--SPF-NPREKIDKKVDFQPSLDLKPFVSDSKGT---DFKYSLYGVLVHT 345
           ********987666********************************..554.6789********************6665...8************ PP
   S: 288  G.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           G +++sGHY+++v+ ++g W ++dD+kV++v+e++vl+   ++aY+lfY r
   Q: 346  GwNTQSGHYYCFVRTSSGMWHNLDDNKVRQVREADVLK---QKAYMLFYVR 393
           **************************************...********87 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAEVSTAAAP EGVLHRRIEF HPARRPHASV AVGGGGFRME TLNPDAAGKA GAGAAVGSSE 60
GEATRSEKAD AGGIDPELSV ARIYLGRIGA GLENLGNTCY LNSVLQCLTY TEPFAAYLQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTCGCGAAC GGCGGCCAGA AAAAAGAAAA AAAAAAGACA GCGCGCCGCA CCAATTTCCC 60
CTCCCTATCG ATCGACCTTG CAAGGTTTAA TCCGGCAGAA TTCCACCAGA AATTCATTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_10g005680

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000845	Aegilops tauschii	54.19	0.00e+00	774.00
IUUC-Aml-002092	Ailuropoda melanoleuca	45.57	2.00e-80	293.00
IUUC-Atr-003102	Amborella trichopoda	59.05	1.00e-147	516.00
IUUC-Apl-003459	Anas platyrhynchos	43.65	7.00e-74	271.00
IUUC-Aca-005360	Anolis carolinensis	46.84	1.00e-87	317.00
IUUC-Aly-006389	Arabidopsis lyrata	62.27	2.00e-141	495.00
IUUC-Ath-006710	Arabidopsis thaliana	50.18	5.00e-142	497.00
IUUC-Ago-007836	Ashbya gossypii	27.56	7.00e-32	131.00
IUUC-Aor-010098	Aspergillus oryzae	26.18	4.00e-27	115.00
IUUC-Ame-011358	Astyanax mexicanus	47.57	2.00e-87	317.00
IUUC-Bta-013047	Bos taurus	45.89	2.00e-86	313.00
IUUC-Bdi-014036	Brachypodium distachyon	60.57	0.00e+00	979.00
IUUC-Bra-018046	Brassica rapa	56.91	3.00e-139	488.00
IUUC-Cel-018186	Caenorhabditis elegans	33.95	2.00e-40	159.00
IUUC-Cja-019203	Callithrix jacchus	44.30	4.00e-84	305.00
IUUC-Cfa-020586	Canis familiaris	45.25	6.00e-80	291.00
IUUC-Cpo-021804	Cavia porcellus	39.13	2.00e-80	293.00
IUUC-Cre-022988	Chlamydomonas reinhardtii	46.22	2.00e-55	207.00
IUUC-Csa-023137	Chlorocebus sabaeus	44.62	8.00e-85	308.00
IUUC-Cho-024575	Choloepus hoffmanni	39.62	4.00e-57	216.00
IUUC-Cin-025230	Ciona intestinalis	51.12	5.00e-60	223.00
IUUC-Cne-027049	Cryptococcus neoformans	37.46	9.00e-40	157.00
IUUC-Cme-027339	Cyanidioschyzon merolae	38.44	2.00e-56	212.00
IUUC-Dre-028587	Danio rerio	44.64	6.00e-90	325.00
IUUC-Dno-029149	Dasypus novemcinctus	45.57	4.00e-80	292.00
IUUC-Dor-030836	Dipodomys ordii	34.61	9.00e-62	231.00
IUUC-Dme-032119	Drosophila melanogaster	36.08	2.00e-49	190.00
IUUC-Ete-033088	Echinops telfairi	41.50	1.00e-75	277.00
IUUC-Eca-033600	Equus caballus	45.89	6.00e-81	295.00
IUUC-Eeu-035019	Erinaceus europaeus	39.41	8.00e-59	219.00
IUUC-Fca-035792	Felis catus	44.81	4.00e-83	302.00
IUUC-Fal-036852	Ficedula albicollis	46.28	8.00e-80	291.00
IUUC-Gmo-039033	Gadus morhua	45.25	3.00e-86	312.00
IUUC-Gga-040664	Gallus gallus	45.89	2.00e-80	293.00
IUUC-Gac-042176	Gasterosteus aculeatus	43.02	2.00e-87	317.00
IUUC-Gma-043113	Glycine max	50.17	1.00e-145	509.00
IUUC-Ggo-045437	Gorilla gorilla	44.62	4.00e-79	289.00
IUUC-Hsa-046863	Homo sapiens	44.62	5.00e-79	288.00
IUUC-Hvu-047306	Hordeum vulgare	91.86	2.00e-147	514.00
IUUC-Itr-048655	Ictidomys tridecemlineatus	44.62	5.00e-84	305.00
IUUC-Lch-049867	Latimeria chalumnae	44.48	8.00e-86	311.00
IUUC-Lpe-051574	Leersia perrieri	61.02	0.00e+00	1041.00
IUUC-Loc-052796	Lepisosteus oculatus	43.54	1.00e-82	300.00
IUUC-Laf-054243	Loxodonta africana	45.57	2.00e-80	293.00
IUUC-Mcc-055762	Macaca mulatta	44.62	9.00e-85	308.00
IUUC-Meu-056697	Macropus eugenii	43.21	4.00e-80	292.00
IUUC-Mtr-058537	Medicago truncatula	60.33	3.00e-148	518.00
IUUC-Mla-059049	Melampsora laricipopulina	38.46	2.00e-51	196.00
IUUC-Mga-059501	Meleagris gallopavo	41.89	3.00e-72	266.00
IUUC-Mvi-060547	Microbotryum violaceum	40.11	2.00e-69	256.00
IUUC-Mmr-060966	Microcebus murinus	45.57	1.00e-80	294.00
IUUC-Mdo-062733	Monodelphis domestica	42.59	6.00e-81	295.00
IUUC-Mmu-064331	Mus musculus	43.05	4.00e-81	295.00
IUUC-Mac-065039	Musa acuminata	63.70	6.00e-165	573.00
IUUC-Mpu-065759	Mustela putorius furo	45.57	1.00e-80	293.00
IUUC-Mlu-067371	Myotis lucifugus	46.84	5.00e-81	295.00
IUUC-Nle-069004	Nomascus leucogenys	44.81	5.00e-84	305.00
IUUC-Opr-070729	Ochotona princeps	38.61	1.00e-69	257.00
IUUC-Ont-071346	Oreochromis niloticus	45.57	1.00e-87	317.00
IUUC-Oan-072931	Ornithorhynchus anatinus	45.57	2.00e-86	313.00
IUUC-Ocu-074596	Oryctolagus cuniculus	44.95	1.00e-83	303.00
IUUC-Oba-075866	Oryza barthii	62.04	0.00e+00	1046.00
IUUC-Obr-076408	Oryza brachyantha	61.37	0.00e+00	1052.00
IUUC-Ogl-077239	Oryza glaberrima	62.15	0.00e+00	1051.00
IUUC-Ogu-078064	Oryza glumaepatula	62.15	0.00e+00	1060.00
IUUC-Oin-079157	Oryza indica	61.83	0.00e+00	1046.00
IUUC-Olo-080633	Oryza longistaminata	57.03	0.00e+00	744.00
IUUC-Ome-081746	Oryza meridionalis	59.80	0.00e+00	1017.00
IUUC-Oni-082339	Oryza nivara	61.83	0.00e+00	1044.00
IUUC-Opu-083194	Oryza punctata	61.76	0.00e+00	1046.00
IUUC-Oru-085083	Oryza rufipogon	61.94	0.00e+00	1043.00
IUUC-Osa-086180	Oryza sativa	61.75	0.00e+00	1041.00
IUUC-Ola-087255	Oryzias latipes	42.50	3.00e-87	316.00
IUUC-Olu-087773	Ostreococcus lucimarinus	48.11	1.00e-78	285.00
IUUC-Oga-088818	Otolemur garnettii	42.66	3.00e-81	295.00
IUUC-Oar-089410	Ovis aries	45.71	4.00e-86	312.00
IUUC-Ptr-090680	Pan troglodytes	44.62	3.00e-79	289.00
IUUC-Pan-092482	Papio anubis	44.62	9.00e-85	308.00
IUUC-Psi-093277	Pelodiscus sinensis	43.28	4.00e-84	305.00
IUUC-Ppa-095853	Physcomitrella patens	60.61	2.00e-121	429.00
IUUC-Pfo-096807	Poecilia formosa	43.06	3.00e-88	319.00
IUUC-Pab-098724	Pongo abelii	44.62	7.00e-85	308.00
IUUC-Pop-099693	Populus trichocarpa	61.63	9.00e-150	523.00
IUUC-Ppe-101678	Prunus persica	62.86	3.00e-150	525.00
IUUC-Pva-103238	Pteropus vampyrus	38.31	6.00e-68	252.00
IUUC-Pgr-103270	Puccinia graminis	39.43	2.00e-58	219.00
IUUC-Ptt-103887	Puccinia triticina	38.68	5.00e-57	214.00
IUUC-Rno-105340	Rattus norvegicus	42.82	1.00e-79	290.00
IUUC-Sha-107019	Sarcophilus harrisii	45.89	9.00e-81	294.00
IUUC-Sja-107805	Schizosaccharomyces japonicus	40.13	3.00e-57	215.00
IUUC-Spo-108119	Schizosaccharomyces pombe	44.55	5.00e-66	244.00
IUUC-Smo-108727	Selaginella moellendorffii	57.69	1.00e-103	368.00
IUUC-Sit-109895	Setaria italica	76.67	0.00e+00	1311.00
IUUC-Sly-111722	Solanum lycopersicum	65.27	3.00e-145	508.00
IUUC-Stu-112912	Solanum tuberosum	65.01	1.00e-144	506.00
IUUC-Sar-113340	Sorex araneus	44.81	4.00e-84	305.00
IUUC-Sre-114924	Sporisorium reilianum	37.32	3.00e-60	225.00
IUUC-Ssc-116022	Sus scrofa	46.20	4.00e-81	295.00
IUUC-Tgu-116976	Taeniopygia guttata	46.28	4.00e-78	284.00
IUUC-Tru-118391	Takifugu rubripes	45.89	1.00e-88	320.00
IUUC-Tsy-118974	Tarsius syrichta	41.19	2.00e-84	307.00
IUUC-Tni-120064	Tetraodon nigroviridis	45.89	4.00e-88	318.00
IUUC-Tca-120936	Theobroma cacao	57.80	1.00e-154	539.00
IUUC-Tae-124495	Triticum aestivum	60.13	0.00e+00	1020.00
IUUC-Tur-126861	Triticum urartu	52.27	0.00e+00	754.00
IUUC-Tme-127144	Tuber melanosporum	31.13	4.00e-39	156.00
IUUC-Tbe-127377	Tupaia belangeri	35.88	5.00e-49	189.00
IUUC-Ttr-129259	Tursiops truncatus	39.87	1.00e-63	237.00
IUUC-Uma-129416	Ustilago maydis	39.94	2.00e-62	232.00
IUUC-Vvi-131130	Vitis vinifera	64.85	2.00e-160	558.00
IUUC-Xtr-132544	Xenopus tropicalis	42.61	2.00e-82	298.00
IUUC-Xma-133735	Xiphophorus maculatus	43.06	4.00e-88	318.00
IUUC-Yli-134636	Yarrowia lipolytica	31.03	1.00e-32	133.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence